Analysis of interatomic Contacts of Structural Units in PDB entry:
1GHR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GHR entry

There is 1 chain in PDB entry 1GHR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 1PHE 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1GHR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 26Right-handed alpha
Helix 2
2
A
36 44Right-handed alpha
Helix 3
3
A
55 57Right-handed 310
Helix 4
4
A
58 65Right-handed alpha
Helix 5
5
A
65 77Right-handed alpha
Helix 6
6
A
97 100Right-handed 310
Helix 7
7
A
101 116Right-handed alpha
Helix 8
8
A
137 141Right-handed 310
Helix 9
9
A
144 162Right-handed alpha
Helix 10
10
A
170 177Right-handed alpha
Helix 11
11
A
183 188Right-handed alpha
Helix 12
12
A
205 220Right-handed alpha
Helix 13
13
A
244 259Right-handed alpha
Helix 14
14
A
286 291Right-handed 310
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There are 3 sheets in PDB entry 1GHR. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 232first strand
Strand 2
A
165 168parallel
Strand 3
A
122 128parallel
Strand 4
A
84 92parallel
Strand 5
A
49 54parallel
Strand 6
A
29 32parallel
Strand 7
A
2 4parallel
Strand 8
A
273 274parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 134first strand
Strand 2
A
142 143anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 198first strand
Strand 2
A
201 203anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il