Analysis of interatomic Contacts of Structural Units in PDB entry:
1GL6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GL6 entry

There are 6 chains in PDB entry 1GL6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 76THR 506
B
 ASN 72GLY 505
D
 GLN 76GLY 505
E
 GLN 76GLU 504
F
 GLY 77GLY 505
G
 GLY 77GLY 505
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are127 helices in PDB entry 1GL6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
95 104Right-handed alpha
Helix 2
2
A
118 124Right-handed 310
Helix 3
3
A
135 150Right-handed alpha
Helix 4
4
A
161 168Right-handed alpha
Helix 5
5
A
186 191Right-handed 310
Helix 6
6
A
195 205Right-handed alpha
Helix 7
7
A
210 234Right-handed alpha
Helix 8
8
A
238 248Right-handed alpha
Helix 9
9
A
250 259Right-handed alpha
Helix 10
10
A
262 267Right-handed alpha
Helix 11
11
A
270 288Right-handed alpha
Helix 12
12
A
288 293Right-handed alpha
Helix 13
13
A
300 307Right-handed alpha
Helix 14
14
A
318 320Right-handed 310
Helix 15
15
A
321 340Right-handed alpha
Helix 16
16
A
357 361Right-handed 310
Helix 17
17
A
366 374Right-handed alpha
Helix 18
18
A
387 396Right-handed alpha
Helix 19
19
A
396 406Right-handed alpha
Helix 20
20
A
419 431Right-handed alpha
Helix 21
21
A
463 469Right-handed alpha
Helix 22
22
B
95 104Right-handed alpha
Helix 23
23
B
118 124Right-handed 310
Helix 24
24
B
135 150Right-handed alpha
Helix 25
25
B
161 168Right-handed alpha
Helix 26
26
B
186 191Right-handed 310
Helix 27
27
B
195 205Right-handed alpha
Helix 28
28
B
210 234Right-handed alpha
Helix 29
29
B
238 248Right-handed alpha
Helix 30
30
B
250 259Right-handed alpha
Helix 31
31
B
262 267Right-handed alpha
Helix 32
32
B
270 288Right-handed alpha
Helix 33
33
B
288 293Right-handed alpha
Helix 34
34
B
300 307Right-handed alpha
Helix 35
35
B
318 320Right-handed 310
Helix 36
36
B
321 340Right-handed alpha
Helix 37
37
B
357 361Right-handed 310
Helix 38
38
B
366 374Right-handed alpha
Helix 39
39
B
387 396Right-handed alpha
Helix 40
40
B
396 406Right-handed alpha
Helix 41
41
B
419 431Right-handed alpha
Helix 42
42
B
463 469Right-handed alpha
Helix 43
43
D
95 104Right-handed alpha
Helix 44
44
D
118 124Right-handed 310
Helix 45
45
D
135 150Right-handed alpha
Helix 46
46
D
161 168Right-handed alpha
Helix 47
47
D
186 191Right-handed 310
Helix 48
48
D
195 205Right-handed alpha
Helix 49
49
D
210 234Right-handed alpha
Helix 50
50
D
238 248Right-handed alpha
Helix 51
51
D
250 259Right-handed alpha
Helix 52
52
D
262 267Right-handed alpha
Helix 53
53
D
270 288Right-handed alpha
Helix 54
54
D
288 293Right-handed alpha
Helix 55
55
D
300 307Right-handed alpha
Helix 56
56
D
318 320Right-handed 310
Helix 57
57
D
321 340Right-handed alpha
Helix 58
58
D
357 361Right-handed 310
Helix 59
59
D
366 374Right-handed alpha
Helix 60
60
D
387 396Right-handed alpha
Helix 61
61
D
396 406Right-handed alpha
Helix 62
62
D
419 431Right-handed alpha
Helix 63
63
D
463 469Right-handed alpha
Helix 64
64
E
95 104Right-handed alpha
Helix 65
65
E
118 124Right-handed 310
Helix 66
66
E
135 150Right-handed alpha
Helix 67
67
E
161 168Right-handed alpha
Helix 68
68
E
186 191Right-handed 310
Helix 69
69
E
195 205Right-handed alpha
Helix 70
70
E
210 234Right-handed alpha
Helix 71
71
E
238 248Right-handed alpha
Helix 72
72
E
250 259Right-handed alpha
Helix 73
73
E
262 267Right-handed alpha
Helix 74
74
E
270 288Right-handed alpha
Helix 75
75
E
288 293Right-handed alpha
Helix 76
76
E
300 307Right-handed alpha
Helix 77
77
E
318 320Right-handed 310
Helix 78
78
E
321 340Right-handed alpha
Helix 79
79
E
341 343Right-handed 310
Helix 80
80
E
357 361Right-handed 310
Helix 81
81
E
366 374Right-handed alpha
Helix 82
82
E
387 396Right-handed alpha
Helix 83
83
E
396 406Right-handed alpha
Helix 84
84
E
419 431Right-handed alpha
Helix 85
85
E
463 469Right-handed alpha
Helix 86
86
F
95 104Right-handed alpha
Helix 87
87
F
118 124Right-handed 310
Helix 88
88
F
135 150Right-handed alpha
Helix 89
89
F
161 168Right-handed alpha
Helix 90
90
F
186 191Right-handed 310
Helix 91
91
F
195 205Right-handed alpha
Helix 92
92
F
210 234Right-handed alpha
Helix 93
93
F
238 248Right-handed alpha
Helix 94
94
F
250 259Right-handed alpha
Helix 95
95
F
262 267Right-handed alpha
Helix 96
96
F
270 288Right-handed alpha
Helix 97
97
F
288 293Right-handed alpha
Helix 98
98
F
300 307Right-handed alpha
Helix 99
99
F
318 320Right-handed 310
Helix 100
100
F
321 340Right-handed alpha
Helix 101
101
F
357 361Right-handed 310
Helix 102
102
F
366 374Right-handed alpha
Helix 103
103
F
387 396Right-handed alpha
Helix 104
104
F
396 406Right-handed alpha
Helix 105
105
F
419 431Right-handed alpha
Helix 106
106
F
463 469Right-handed alpha
Helix 107
107
G
95 104Right-handed alpha
Helix 108
108
G
118 124Right-handed 310
Helix 109
109
G
135 150Right-handed alpha
Helix 110
110
G
161 168Right-handed alpha
Helix 111
111
G
186 191Right-handed 310
Helix 112
112
G
195 205Right-handed alpha
Helix 113
113
G
210 234Right-handed alpha
Helix 114
114
G
238 248Right-handed alpha
Helix 115
115
G
250 259Right-handed alpha
Helix 116
116
G
262 267Right-handed alpha
Helix 117
117
G
270 288Right-handed alpha
Helix 118
118
G
288 293Right-handed alpha
Helix 119
119
G
300 307Right-handed alpha
Helix 120
120
G
318 320Right-handed 310
Helix 121
121
G
321 340Right-handed alpha
Helix 122
122
G
357 361Right-handed 310
Helix 123
123
G
366 374Right-handed alpha
Helix 124
124
G
387 396Right-handed alpha
Helix 125
125
G
396 406Right-handed alpha
Helix 126
126
G
419 431Right-handed alpha
Helix 127
127
G
463 469Right-handed alpha
Back to top of page

There are 18 sheets in PDB entry 1GL6. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, A, DB, C, EA, EB, EC, FA, FB, FC, GA, GB, GC,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 90first strand
Strand 2
A
432 437anti-parallel
Strand 3
A
456 460anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 94first strand
Strand 2
A
485 489parallel
Strand 3
A
474 478anti-parallel
Strand 4
A
409 412anti-parallel
Strand 5
A
126 129parallel
Strand 6
A
379 385parallel
Strand 7
A
351 355parallel
Strand 8
A
153 159parallel
Strand 9
A
313 317parallel
Strand 10
A
173 175parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 112first strand
Strand 2
A
115 116anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 90first strand
Strand 2
B
432 437anti-parallel
Strand 3
B
455 460anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 94first strand
Strand 2
B
485 489parallel
Strand 3
B
474 478anti-parallel
Strand 4
B
409 412anti-parallel
Strand 5
B
126 129parallel
Strand 6
B
379 385parallel
Strand 7
B
351 355parallel
Strand 8
B
153 159parallel
Strand 9
B
313 317parallel
Strand 10
B
173 175parallel
Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 112first strand
Strand 2
B
115 116anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
86 90first strand
Strand 2
D
432 437anti-parallel
Strand 3
D
455 460anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
93 94first strand
Strand 2
D
485 489parallel
Strand 3
D
474 478anti-parallel
Strand 4
D
409 412anti-parallel
Strand 5
D
126 129parallel
Strand 6
D
379 385parallel
Strand 7
D
351 355parallel
Strand 8
D
153 159parallel
Strand 9
D
313 317parallel
Strand 10
D
173 175parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
111 112first strand
Strand 2
D
115 116anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
86 90first strand
Strand 2
E
432 437anti-parallel
Strand 3
E
455 460anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
93 94first strand
Strand 2
E
485 489parallel
Strand 3
E
474 478anti-parallel
Strand 4
E
409 412anti-parallel
Strand 5
E
126 129parallel
Strand 6
E
379 385parallel
Strand 7
E
351 355parallel
Strand 8
E
153 159parallel
Strand 9
E
313 317parallel
Strand 10
E
173 175parallel
Back to list of sheets
Back to top of page

There are 2 strands in EC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
111 112first strand
Strand 2
E
115 116anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
86 90first strand
Strand 2
F
432 437anti-parallel
Strand 3
F
455 460anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
93 94first strand
Strand 2
F
485 489parallel
Strand 3
F
474 478anti-parallel
Strand 4
F
409 412anti-parallel
Strand 5
F
126 129parallel
Strand 6
F
379 385parallel
Strand 7
F
351 355parallel
Strand 8
F
153 159parallel
Strand 9
F
313 317parallel
Strand 10
F
173 175parallel
Back to list of sheets
Back to top of page

There are 2 strands in FC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
111 112first strand
Strand 2
F
115 116anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
86 90first strand
Strand 2
G
432 437anti-parallel
Strand 3
G
455 460anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in GB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
111 112first strand
Strand 2
G
115 116anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in GC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
173 175first strand
Strand 2
G
313 317parallel
Strand 3
G
153 159parallel
Strand 4
G
351 355parallel
Strand 5
G
379 385parallel
Strand 6
G
126 129parallel
Strand 7
G
409 412parallel
Strand 8
G
474 478anti-parallel
Strand 9
G
486 489anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il