Analysis of interatomic Contacts of Structural Units in PDB entry:
1GLJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GLJ entry

There are 2 chains in PDB entry 1GLJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
Y
 GLU 2HIS 499
O
 GLU 2HIS 499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 1GLJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
Y
49 63Right-handed alpha
Helix 2
2
Y
71 73Right-handed 310
Helix 3
3
Y
109 118Right-handed alpha
Helix 4
4
Y
121 127Right-handed alpha
Helix 5
5
Y
138 147Right-handed alpha
Helix 6
6
Y
152 156Right-handed alpha
Helix 7
7
Y
165 173Right-handed alpha
Helix 8
8
Y
183 189Right-handed alpha
Helix 9
9
Y
201 206Right-handed alpha
Helix 10
10
Y
245 252Right-handed alpha
Helix 11
11
Y
310 318Right-handed alpha
Helix 12
12
Y
326 335Right-handed 310
Helix 13
13
Y
373 399Right-handed alpha
Helix 14
14
Y
411 414Right-handed 310
Helix 15
15
Y
416 426Right-handed alpha
Helix 16
16
Y
438 451Right-handed alpha
Helix 17
17
Y
460 463Right-handed 310
Helix 18
18
Y
476 493Right-handed alpha
Helix 19
19
O
49 67Right-handed alpha
Helix 20
20
O
71 73Right-handed 310
Helix 21
21
O
109 117Right-handed alpha
Helix 22
22
O
121 128Right-handed alpha
Helix 23
23
O
137 147Right-handed alpha
Helix 24
24
O
152 156Right-handed alpha
Helix 25
25
O
165 173Right-handed alpha
Helix 26
26
O
183 189Right-handed alpha
Helix 27
27
O
201 207Right-handed alpha
Helix 28
28
O
211 213Right-handed 310
Helix 29
29
O
245 252Right-handed alpha
Helix 30
30
O
310 318Right-handed alpha
Helix 31
31
O
327 333Right-handed 310
Helix 32
32
O
373 399Right-handed alpha
Helix 33
33
O
411 414Right-handed 310
Helix 34
34
O
416 426Right-handed alpha
Helix 35
35
O
438 451Right-handed alpha
Helix 36
36
O
476 493Right-handed alpha
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There are 12 sheets in PDB entry 1GLJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
77 81first strand
Strand 2
Y
6 11parallel
Strand 3
Y
16 21anti-parallel
Strand 4
Y
27 31anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
86 90first strand
Strand 2
Y
160 164anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
180 182first strand
Strand 2
Y
216 218parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
225 227first strand
Strand 2
Y
237 239anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
466 470first strand
Strand 2
Y
429 433anti-parallel
Strand 3
Y
405 409parallel
Strand 4
Y
261 265parallel
Strand 5
Y
269 274anti-parallel
Strand 6
Y
298 306anti-parallel
Strand 7
Y
287 292anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
343 345first strand
Strand 2
Y
363 365anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
77 81first strand
Strand 2
O
6 11parallel
Strand 3
O
15 21anti-parallel
Strand 4
O
27 34anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
86 90first strand
Strand 2
O
160 164anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
180 182first strand
Strand 2
O
216 218parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
225 227first strand
Strand 2
O
237 239anti-parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
466 470first strand
Strand 2
O
429 433anti-parallel
Strand 3
O
405 409parallel
Strand 4
O
261 265parallel
Strand 5
O
269 274anti-parallel
Strand 6
O
297 306anti-parallel
Strand 7
O
287 293anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
343 345first strand
Strand 2
O
363 365anti-parallel
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