Analysis of interatomic Contacts of Structural Units in PDB entry:
1GM6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GM6 entry

There is 1 chain in PDB entry 1GM6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 8SER 166
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 1GM6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 36Right-handed 310
Helix 2
AA2
A
130 143Right-handed alpha
Helix 3
AA3
A
147 149Right-handed 310
Helix 4
AA4
A
155 157Right-handed 310
Helix 5
AA5
A
160 164Right-handed 310
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There is 1 sheet (AA1) in PDB entry 1GM6.

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 21first strand
Strand 2
A
44 50anti-parallel
Strand 3
A
56 64anti-parallel
Strand 4
A
67 79anti-parallel
Strand 5
A
82 86anti-parallel
Strand 6
A
90 99anti-parallel
Strand 7
A
103 112anti-parallel
Strand 8
A
115 124anti-parallel
Strand 9
A
23 29anti-parallel
Strand 10
A
151 153anti-parallel
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