Analysis of interatomic Contacts of Structural Units in PDB entry:
1GNJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GNJ entry

There is 1 chain in PDB entry 1GNJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 3GLY 584
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 1GNJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 13Right-handed alpha
Helix 2
2
A
15 31Right-handed alpha
Helix 3
3
A
35 56Right-handed alpha
Helix 4
4
A
65 75Right-handed alpha
Helix 5
5
A
79 85Right-handed alpha
Helix 6
6
A
86 93Right-handed 310
Helix 7
7
A
94 104Right-handed alpha
Helix 8
8
A
119 130Right-handed alpha
Helix 9
9
A
130 146Right-handed alpha
Helix 10
10
A
150 169Right-handed alpha
Helix 11
11
A
173 223Right-handed alpha
Helix 12
12
A
227 248Right-handed alpha
Helix 13
13
A
249 267Right-handed alpha
Helix 14
14
A
268 271Right-handed 310
Helix 15
15
A
275 281Right-handed alpha
Helix 16
16
A
282 284Right-handed 310
Helix 17
17
A
285 293Right-handed alpha
Helix 18
18
A
304 310Right-handed alpha
Helix 19
19
A
314 322Right-handed alpha
Helix 20
20
A
322 337Right-handed alpha
Helix 21
21
A
342 361Right-handed alpha
Helix 22
22
A
365 370Right-handed alpha
Helix 23
23
A
373 398Right-handed alpha
Helix 24
24
A
399 415Right-handed alpha
Helix 25
25
A
419 438Right-handed alpha
Helix 26
26
A
441 467Right-handed alpha
Helix 27
27
A
470 478Right-handed alpha
Helix 28
28
A
483 490Right-handed alpha
Helix 29
29
A
504 508Right-handed 310
Helix 30
30
A
511 516Right-handed alpha
Helix 31
31
A
517 536Right-handed alpha
Helix 32
32
A
540 560Right-handed alpha
Helix 33
33
A
565 583Right-handed alpha
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There are no sheets in PDB entry 1GNJ
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