Analysis of interatomic Contacts of Structural Units in PDB entry:
1GO4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GO4 entry

There are 8 chains in PDB entry 1GO4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 8VAL 203
B
 GLY 10ASN 204
C
 GLY 10ASN 204
D
 ILE 11VAL 203
E
 PHE 493GLU 579
F
 PHE 493GLU 579
G
 SER 485VAL 584
H
 ALA 487GLU 579
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 1GO4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 35Right-handed alpha
Helix 2
2
A
39 41Right-handed 310
Helix 3
3
A
58 78Right-handed alpha
Helix 4
4
A
108 112Right-handed 310
Helix 5
5
A
120 138Right-handed alpha
Helix 6
6
A
139 141Right-handed 310
Helix 7
7
B
12 35Right-handed alpha
Helix 8
8
B
39 41Right-handed 310
Helix 9
9
B
58 79Right-handed alpha
Helix 10
10
B
108 113Right-handed 310
Helix 11
11
B
120 140Right-handed alpha
Helix 12
12
C
12 35Right-handed alpha
Helix 13
13
C
39 41Right-handed 310
Helix 14
14
C
58 78Right-handed alpha
Helix 15
15
C
108 113Right-handed 310
Helix 16
16
C
120 138Right-handed alpha
Helix 17
17
C
139 141Right-handed 310
Helix 18
18
D
12 35Right-handed alpha
Helix 19
19
D
39 41Right-handed 310
Helix 20
20
D
60 78Right-handed alpha
Helix 21
21
D
108 113Right-handed 310
Helix 22
22
D
120 138Right-handed alpha
Helix 23
23
E
493 529Right-handed alpha
Helix 24
24
E
548 576Right-handed alpha
Helix 25
25
F
498 533Right-handed alpha
Helix 26
26
F
548 578Right-handed alpha
Helix 27
27
G
486 528Right-handed alpha
Helix 28
28
G
548 579Right-handed alpha
Helix 29
29
H
493 531Right-handed alpha
Helix 30
30
H
548 578Right-handed alpha
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There are 10 sheets in PDB entry 1GO4. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, CA, CB, CC, A, DB,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 48first strand
Strand 2
A
51 56anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 169first strand
Strand 2
G
540 545anti-parallel
Strand 3
A
149 158anti-parallel
Strand 4
A
81 90anti-parallel
Strand 5
A
96 106anti-parallel
Strand 6
A
191 199anti-parallel
Strand 7
A
179 182anti-parallel
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There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 169first strand
Strand 2
G
540 545anti-parallel
Strand 3
A
149 158anti-parallel
Strand 4
A
81 90anti-parallel
Strand 5
A
96 106anti-parallel
Strand 6
A
191 199anti-parallel
Strand 7
A
186 187anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 48first strand
Strand 2
B
51 56anti-parallel
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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 169first strand
Strand 2
F
540 545anti-parallel
Strand 3
B
149 158anti-parallel
Strand 4
B
81 90anti-parallel
Strand 5
B
96 106anti-parallel
Strand 6
B
191 200anti-parallel
Strand 7
B
178 187anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 48first strand
Strand 2
C
51 56anti-parallel
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There are 7 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
167 169first strand
Strand 2
E
540 545anti-parallel
Strand 3
C
149 158anti-parallel
Strand 4
C
81 90anti-parallel
Strand 5
C
96 106anti-parallel
Strand 6
C
191 200anti-parallel
Strand 7
C
178 182anti-parallel
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There are 7 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
167 169first strand
Strand 2
E
540 545anti-parallel
Strand 3
C
149 158anti-parallel
Strand 4
C
81 90anti-parallel
Strand 5
C
96 106anti-parallel
Strand 6
C
191 200anti-parallel
Strand 7
C
186 187anti-parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
43 48first strand
Strand 2
D
51 56anti-parallel
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There are 7 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
167 169first strand
Strand 2
H
540 545anti-parallel
Strand 3
D
149 158anti-parallel
Strand 4
D
81 90anti-parallel
Strand 5
D
96 106anti-parallel
Strand 6
D
191 200anti-parallel
Strand 7
D
178 187anti-parallel
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