Analysis of interatomic Contacts of Structural Units in PDB entry:
1GOW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GOW entry

There are 2 chains in PDB entry 1GOW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 489
B
 MET 1HIS 489
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 1GOW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 19Right-handed alpha
Helix 2
2
A
32 38Right-handed alpha
Helix 3
3
A
40 44Right-handed alpha
Helix 4
4
A
53 55Right-handed 310
Helix 5
5
A
63 72Right-handed alpha
Helix 6
6
A
84 87Right-handed alpha
Helix 7
7
A
112 120Right-handed alpha
Helix 8
8
A
124 140Right-handed alpha
Helix 9
9
A
155 157Right-handed 310
Helix 10
10
A
160 164Right-handed alpha
Helix 11
11
A
173 175Right-handed 310
Helix 12
12
A
177 194Right-handed alpha
Helix 13
13
A
207 215Right-handed alpha
Helix 14
14
A
218 220Right-handed 310
Helix 15
15
A
229 253Right-handed alpha
Helix 16
16
A
273 285Right-handed 310
Helix 17
17
A
287 295Right-handed alpha
Helix 18
18
A
365 379Right-handed 310
Helix 19
19
A
398 415Right-handed alpha
Helix 20
20
A
433 438Right-handed 310
Helix 21
21
A
457 466Right-handed alpha
Helix 22
22
A
473 478Right-handed 310
Helix 23
23
B
16 19Right-handed alpha
Helix 24
24
B
32 38Right-handed alpha
Helix 25
25
B
40 44Right-handed alpha
Helix 26
26
B
53 55Right-handed 310
Helix 27
27
B
63 72Right-handed alpha
Helix 28
28
B
84 87Right-handed alpha
Helix 29
29
B
112 120Right-handed alpha
Helix 30
30
B
124 140Right-handed alpha
Helix 31
31
B
155 157Right-handed 310
Helix 32
32
B
160 164Right-handed alpha
Helix 33
33
B
173 175Right-handed 310
Helix 34
34
B
177 194Right-handed alpha
Helix 35
35
B
207 215Right-handed alpha
Helix 36
36
B
218 220Right-handed 310
Helix 37
37
B
229 253Right-handed alpha
Helix 38
38
B
273 285Right-handed 310
Helix 39
39
B
287 295Right-handed alpha
Helix 40
40
B
365 379Right-handed 310
Helix 41
41
B
398 415Right-handed alpha
Helix 42
42
B
433 438Right-handed 310
Helix 43
43
B
457 466Right-handed alpha
Helix 44
44
B
473 478Right-handed 310
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There are 10 sheets in PDB entry 1GOW. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
421 425first strand
Strand 2
A
9 13parallel
Strand 3
A
77 81parallel
Strand 4
A
143 147parallel
Strand 5
A
200 202parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 264first strand
Strand 2
A
317 321parallel
Strand 3
A
383 387parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 269first strand
Strand 2
A
324 330parallel
Strand 3
A
333 336anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 300first strand
Strand 2
A
303 306anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
444 447first strand
Strand 2
A
452 455anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
421 425first strand
Strand 2
B
9 13parallel
Strand 3
B
77 81parallel
Strand 4
B
143 147parallel
Strand 5
B
200 202parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
260 264first strand
Strand 2
B
317 321parallel
Strand 3
B
383 387parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
266 269first strand
Strand 2
B
324 330parallel
Strand 3
B
333 336anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
297 300first strand
Strand 2
B
303 306anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
444 447first strand
Strand 2
B
452 455anti-parallel
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