Analysis of interatomic Contacts of Structural Units in PDB entry:
1GOZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GOZ entry

There are 2 chains in PDB entry 1GOZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1001LYS 1238
B
 GLU 2001LYS 2238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1GOZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1013 1016Right-handed 310
Helix 2
2
A
1021 1026Right-handed alpha
Helix 3
3
A
1070 1078Right-handed alpha
Helix 4
4
A
1157 1173Right-handed alpha
Helix 5
5
A
1209 1215Right-handed alpha
Helix 6
6
A
1216 1220Right-handed 310
Helix 7
7
B
2013 2016Right-handed 310
Helix 8
8
B
2021 2026Right-handed alpha
Helix 9
9
B
2070 2078Right-handed alpha
Helix 10
10
B
2157 2173Right-handed alpha
Helix 11
11
B
2209 2215Right-handed alpha
Helix 12
12
B
2216 2218Right-handed 310
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There are 8 sheets in PDB entry 1GOZ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1033 1038first strand
Strand 2
A
1082 1086anti-parallel
Strand 3
A
1118 1120anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1048 1055first strand
Strand 2
A
1060 1067anti-parallel
Strand 3
A
1111 1115parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1141 1152first strand
Strand 2
A
1125 1138anti-parallel
Strand 3
A
1229 1236parallel
Strand 4
A
1182 1191anti-parallel
Strand 5
A
1194 1199anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1154 1156first strand
Strand 2
A
1222 1224anti-parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2033 2038first strand
Strand 2
B
2082 2086anti-parallel
Strand 3
B
2118 2120anti-parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2048 2054first strand
Strand 2
B
2061 2067anti-parallel
Strand 3
B
2111 2115parallel
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There are 5 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2141 2152first strand
Strand 2
B
2125 2138anti-parallel
Strand 3
B
2228 2236parallel
Strand 4
B
2182 2191anti-parallel
Strand 5
B
2195 2199anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2154 2156first strand
Strand 2
B
2222 2224anti-parallel
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