Analysis of interatomic Contacts of Structural Units in PDB entry:
1GQ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GQ6 entry

There are 3 chains in PDB entry 1GQ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 9HIS 309
B
 SER 9HIS 309
C
 SER 9HIS 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 1GQ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 21Right-handed 310
Helix 2
2
A
48 50Right-handed 310
Helix 3
3
A
51 61Right-handed alpha
Helix 4
4
A
73 78Right-handed alpha
Helix 5
5
A
92 111Right-handed alpha
Helix 6
6
A
120 122Right-handed 310
Helix 7
7
A
123 136Right-handed alpha
Helix 8
8
A
162 170Right-handed alpha
Helix 9
9
A
193 199Right-handed alpha
Helix 10
10
A
206 226Right-handed alpha
Helix 11
11
A
256 264Right-handed alpha
Helix 12
12
A
265 270Right-handed 310
Helix 13
13
A
281 285Right-handed 310
Helix 14
14
A
288 309Right-handed alpha
Helix 15
15
B
17 21Right-handed 310
Helix 16
16
B
48 50Right-handed 310
Helix 17
17
B
51 61Right-handed alpha
Helix 18
18
B
73 78Right-handed alpha
Helix 19
19
B
92 111Right-handed alpha
Helix 20
20
B
120 122Right-handed 310
Helix 21
21
B
123 136Right-handed alpha
Helix 22
22
B
162 170Right-handed alpha
Helix 23
23
B
193 199Right-handed alpha
Helix 24
24
B
206 226Right-handed alpha
Helix 25
25
B
256 264Right-handed alpha
Helix 26
26
B
265 270Right-handed 310
Helix 27
27
B
281 285Right-handed 310
Helix 28
28
B
288 309Right-handed alpha
Helix 29
29
C
17 21Right-handed 310
Helix 30
30
C
48 50Right-handed 310
Helix 31
31
C
51 61Right-handed alpha
Helix 32
32
C
73 78Right-handed alpha
Helix 33
33
C
92 111Right-handed alpha
Helix 34
34
C
120 122Right-handed 310
Helix 35
35
C
123 136Right-handed alpha
Helix 36
36
C
162 170Right-handed alpha
Helix 37
37
C
193 199Right-handed alpha
Helix 38
38
C
206 226Right-handed alpha
Helix 39
39
C
256 265Right-handed alpha
Helix 40
40
C
266 270Right-handed 310
Helix 41
41
C
281 285Right-handed 310
Helix 42
42
C
288 309Right-handed alpha
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There are 3 sheets in PDB entry 1GQ6. Click on sheet of interest to get list of strands forming it: AA, BA, CA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 85first strand
Strand 2
A
32 37parallel
Strand 3
A
113 118parallel
Strand 4
A
271 278parallel
Strand 5
A
229 235parallel
Strand 6
A
138 143parallel
Strand 7
A
173 183parallel
Strand 8
A
202 205parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 85first strand
Strand 2
B
32 37parallel
Strand 3
B
113 118parallel
Strand 4
B
271 278parallel
Strand 5
B
229 235parallel
Strand 6
B
138 143parallel
Strand 7
B
173 183parallel
Strand 8
B
202 205parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
80 85first strand
Strand 2
C
32 37parallel
Strand 3
C
113 118parallel
Strand 4
C
271 278parallel
Strand 5
C
229 235parallel
Strand 6
C
138 143parallel
Strand 7
C
173 183parallel
Strand 8
C
202 205parallel
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