Analysis of interatomic Contacts of Structural Units in PDB entry:
1GQ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GQ7 entry

There are 6 chains in PDB entry 1GQ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 9HIS 309
B
 SER 9HIS 309
C
 SER 9HIS 309
D
 SER 9HIS 309
E
 SER 9HIS 309
F
 SER 9HIS 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 90 helices in PDB entry 1GQ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 21Right-handed 310
Helix 2
2
A
48 50Right-handed 310
Helix 3
3
A
51 60Right-handed alpha
Helix 4
4
A
61 63Right-handed 310
Helix 5
5
A
73 78Right-handed alpha
Helix 6
6
A
92 111Right-handed alpha
Helix 7
7
A
120 122Right-handed 310
Helix 8
8
A
123 136Right-handed alpha
Helix 9
9
A
162 170Right-handed alpha
Helix 10
10
A
193 199Right-handed alpha
Helix 11
11
A
206 226Right-handed alpha
Helix 12
12
A
256 264Right-handed alpha
Helix 13
13
A
265 270Right-handed 310
Helix 14
14
A
281 285Right-handed 310
Helix 15
15
A
288 309Right-handed alpha
Helix 16
16
B
17 21Right-handed 310
Helix 17
17
B
48 50Right-handed 310
Helix 18
18
B
51 60Right-handed alpha
Helix 19
19
B
61 63Right-handed 310
Helix 20
20
B
73 78Right-handed alpha
Helix 21
21
B
92 111Right-handed alpha
Helix 22
22
B
120 122Right-handed 310
Helix 23
23
B
123 136Right-handed alpha
Helix 24
24
B
162 170Right-handed alpha
Helix 25
25
B
193 199Right-handed alpha
Helix 26
26
B
206 226Right-handed alpha
Helix 27
27
B
256 264Right-handed alpha
Helix 28
28
B
265 270Right-handed 310
Helix 29
29
B
281 285Right-handed 310
Helix 30
30
B
288 309Right-handed alpha
Helix 31
31
C
17 21Right-handed 310
Helix 32
32
C
48 50Right-handed 310
Helix 33
33
C
51 60Right-handed alpha
Helix 34
34
C
61 63Right-handed 310
Helix 35
35
C
73 78Right-handed alpha
Helix 36
36
C
92 111Right-handed alpha
Helix 37
37
C
120 122Right-handed 310
Helix 38
38
C
123 136Right-handed alpha
Helix 39
39
C
162 170Right-handed alpha
Helix 40
40
C
193 199Right-handed alpha
Helix 41
41
C
206 226Right-handed alpha
Helix 42
42
C
256 264Right-handed alpha
Helix 43
43
C
265 270Right-handed 310
Helix 44
44
C
281 285Right-handed 310
Helix 45
45
C
288 309Right-handed alpha
Helix 46
46
D
17 21Right-handed 310
Helix 47
47
D
48 50Right-handed 310
Helix 48
48
D
51 60Right-handed alpha
Helix 49
49
D
61 63Right-handed 310
Helix 50
50
D
73 78Right-handed alpha
Helix 51
51
D
92 111Right-handed alpha
Helix 52
52
D
120 122Right-handed 310
Helix 53
53
D
123 136Right-handed alpha
Helix 54
54
D
162 170Right-handed alpha
Helix 55
55
D
193 199Right-handed alpha
Helix 56
56
D
206 226Right-handed alpha
Helix 57
57
D
256 264Right-handed alpha
Helix 58
58
D
265 270Right-handed 310
Helix 59
59
D
281 285Right-handed 310
Helix 60
60
D
288 309Right-handed alpha
Helix 61
61
E
17 21Right-handed 310
Helix 62
62
E
48 50Right-handed 310
Helix 63
63
E
51 60Right-handed alpha
Helix 64
64
E
61 63Right-handed 310
Helix 65
65
E
73 78Right-handed alpha
Helix 66
66
E
92 111Right-handed alpha
Helix 67
67
E
120 122Right-handed 310
Helix 68
68
E
123 136Right-handed alpha
Helix 69
69
E
162 170Right-handed alpha
Helix 70
70
E
193 199Right-handed alpha
Helix 71
71
E
206 226Right-handed alpha
Helix 72
72
E
256 264Right-handed alpha
Helix 73
73
E
265 270Right-handed 310
Helix 74
74
E
281 285Right-handed 310
Helix 75
75
E
288 309Right-handed alpha
Helix 76
76
F
17 21Right-handed 310
Helix 77
77
F
48 50Right-handed 310
Helix 78
78
F
51 60Right-handed alpha
Helix 79
79
F
61 63Right-handed 310
Helix 80
80
F
73 78Right-handed alpha
Helix 81
81
F
92 111Right-handed alpha
Helix 82
82
F
120 122Right-handed 310
Helix 83
83
F
123 136Right-handed alpha
Helix 84
84
F
162 170Right-handed alpha
Helix 85
85
F
193 199Right-handed alpha
Helix 86
86
F
206 226Right-handed alpha
Helix 87
87
F
256 264Right-handed alpha
Helix 88
88
F
265 270Right-handed 310
Helix 89
89
F
281 285Right-handed 310
Helix 90
90
F
288 309Right-handed alpha
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There are 6 sheets in PDB entry 1GQ7. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA, FA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 85first strand
Strand 2
A
32 37parallel
Strand 3
A
113 118parallel
Strand 4
A
271 278parallel
Strand 5
A
229 235parallel
Strand 6
A
138 143parallel
Strand 7
A
173 183parallel
Strand 8
A
202 205parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 85first strand
Strand 2
B
32 37parallel
Strand 3
B
113 118parallel
Strand 4
B
271 278parallel
Strand 5
B
229 235parallel
Strand 6
B
138 143parallel
Strand 7
B
173 183parallel
Strand 8
B
202 205parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
80 85first strand
Strand 2
C
32 37parallel
Strand 3
C
113 118parallel
Strand 4
C
271 278parallel
Strand 5
C
229 235parallel
Strand 6
C
138 143parallel
Strand 7
C
173 183parallel
Strand 8
C
202 205parallel
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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
80 85first strand
Strand 2
D
32 37parallel
Strand 3
D
113 118parallel
Strand 4
D
271 278parallel
Strand 5
D
229 235parallel
Strand 6
D
138 143parallel
Strand 7
D
173 183parallel
Strand 8
D
202 205parallel
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There are 8 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
80 85first strand
Strand 2
E
32 36parallel
Strand 3
E
113 117parallel
Strand 4
E
271 278parallel
Strand 5
E
229 235parallel
Strand 6
E
138 143parallel
Strand 7
E
173 183parallel
Strand 8
E
202 205parallel
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There are 8 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
80 85first strand
Strand 2
F
32 36parallel
Strand 3
F
113 117parallel
Strand 4
F
271 278parallel
Strand 5
F
229 235parallel
Strand 6
F
138 143parallel
Strand 7
F
173 183parallel
Strand 8
F
202 205parallel
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