Analysis of interatomic Contacts of Structural Units in PDB entry:
1GQ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GQ8 entry

There is 1 chain in PDB entry 1GQ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LEU 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1GQ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 29Right-handed alpha
Helix 2
AA2
A
83 87Right-handed 310
Helix 3
AA3
A
108 112Right-handed 310
Helix 4
AA4
A
212 219Right-handed 310
Helix 5
AA5
A
270 274Right-handed 310
Helix 6
AA6
A
289 295Right-handed alpha
Helix 7
AA7
A
297 302Right-handed alpha
Helix 8
AA8
A
303 307Right-handed 310
Helix 9
AA9
A
308 312Right-handed 310
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There are 3 sheets in PDB entry 1GQ8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 11first strand
Strand 2
A
37 41parallel
Strand 3
A
59 63parallel
Strand 4
A
97 105parallel
Strand 5
A
124 132parallel
Strand 6
A
151 154parallel
Strand 7
A
171 174parallel
Strand 8
A
205 208parallel
Strand 9
A
239 240parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 47first strand
Strand 2
A
69 73parallel
Strand 3
A
97 105parallel
Strand 4
A
124 132parallel
Strand 5
A
144 148parallel
Strand 6
A
164 168parallel
Strand 7
A
198 202parallel
Strand 8
A
232 236parallel
Strand 9
A
262 266parallel
Strand 10
A
284 286parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
89 91parallel
Strand 3
A
117 119parallel
Strand 4
A
138 140parallel
Strand 5
A
159 161parallel
Strand 6
A
183 188parallel
Strand 7
A
221 224parallel
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