Analysis of interatomic Contacts of Structural Units in PDB entry:
1GSZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GSZ entry

There are 3 chains in PDB entry 1GSZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 10GLU 629
B
 ALA 10GLU 629
C
 ALA 10GLU 629
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 94 helices in PDB entry 1GSZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 26Right-handed alpha
Helix 2
2
A
40 53Right-handed alpha
Helix 3
3
A
57 72Right-handed alpha
Helix 4
4
A
87 102Right-handed alpha
Helix 5
5
A
107 119Right-handed alpha
Helix 6
6
A
120 126Right-handed 310
Helix 7
7
A
127 137Right-handed alpha
Helix 8
8
A
141 145Right-handed 310
Helix 9
9
A
149 155Right-handed 310
Helix 10
10
A
167 184Right-handed alpha
Helix 11
11
A
190 194Right-handed 310
Helix 12
12
A
195 199Right-handed 310
Helix 13
13
A
215 229Right-handed alpha
Helix 14
14
A
236 252Right-handed alpha
Helix 15
15
A
261 275Right-handed alpha
Helix 16
16
A
280 290Right-handed alpha
Helix 17
17
A
309 325Right-handed alpha
Helix 18
18
A
330 344Right-handed alpha
Helix 19
19
A
350 354Right-handed 310
Helix 20
20
A
374 387Right-handed alpha
Helix 21
21
A
392 409Right-handed alpha
Helix 22
22
A
428 432Right-handed 310
Helix 23
23
A
445 460Right-handed alpha
Helix 24
24
A
465 479Right-handed alpha
Helix 25
25
A
492 507Right-handed alpha
Helix 26
26
A
513 525Right-handed alpha
Helix 27
27
A
536 541Right-handed 310
Helix 28
28
A
542 546Right-handed 310
Helix 29
29
A
552 566Right-handed alpha
Helix 30
30
A
571 585Right-handed alpha
Helix 31
31
A
611 625Right-handed alpha
Helix 32
32
B
11 26Right-handed alpha
Helix 33
33
B
40 53Right-handed alpha
Helix 34
34
B
57 72Right-handed alpha
Helix 35
35
B
87 102Right-handed alpha
Helix 36
36
B
107 120Right-handed alpha
Helix 37
37
B
121 126Right-handed 310
Helix 38
38
B
127 137Right-handed alpha
Helix 39
39
B
141 145Right-handed 310
Helix 40
40
B
149 155Right-handed 310
Helix 41
41
B
167 184Right-handed alpha
Helix 42
42
B
190 194Right-handed 310
Helix 43
43
B
195 199Right-handed 310
Helix 44
44
B
215 229Right-handed alpha
Helix 45
45
B
236 252Right-handed alpha
Helix 46
46
B
261 275Right-handed alpha
Helix 47
47
B
280 293Right-handed alpha
Helix 48
48
B
309 324Right-handed alpha
Helix 49
49
B
330 344Right-handed alpha
Helix 50
50
B
349 354Right-handed 310
Helix 51
51
B
374 386Right-handed alpha
Helix 52
52
B
392 411Right-handed alpha
Helix 53
53
B
428 432Right-handed 310
Helix 54
54
B
445 460Right-handed alpha
Helix 55
55
B
465 479Right-handed alpha
Helix 56
56
B
492 507Right-handed alpha
Helix 57
57
B
513 525Right-handed alpha
Helix 58
58
B
536 541Right-handed 310
Helix 59
59
B
542 546Right-handed 310
Helix 60
60
B
552 566Right-handed alpha
Helix 61
61
B
571 585Right-handed alpha
Helix 62
62
B
611 625Right-handed alpha
Helix 63
63
C
11 26Right-handed alpha
Helix 64
64
C
40 53Right-handed alpha
Helix 65
65
C
57 72Right-handed alpha
Helix 66
66
C
87 102Right-handed alpha
Helix 67
67
C
107 119Right-handed alpha
Helix 68
68
C
120 126Right-handed 310
Helix 69
69
C
127 137Right-handed alpha
Helix 70
70
C
141 145Right-handed 310
Helix 71
71
C
149 155Right-handed 310
Helix 72
72
C
167 184Right-handed alpha
Helix 73
73
C
190 194Right-handed 310
Helix 74
74
C
195 199Right-handed 310
Helix 75
75
C
215 230Right-handed alpha
Helix 76
76
C
236 251Right-handed alpha
Helix 77
77
C
261 275Right-handed alpha
Helix 78
78
C
280 289Right-handed alpha
Helix 79
79
C
290 292Right-handed 310
Helix 80
80
C
309 325Right-handed alpha
Helix 81
81
C
330 344Right-handed alpha
Helix 82
82
C
349 354Right-handed 310
Helix 83
83
C
374 386Right-handed alpha
Helix 84
84
C
392 411Right-handed alpha
Helix 85
85
C
428 432Right-handed 310
Helix 86
86
C
445 460Right-handed alpha
Helix 87
87
C
465 479Right-handed alpha
Helix 88
88
C
492 507Right-handed alpha
Helix 89
89
C
513 525Right-handed alpha
Helix 90
90
C
536 541Right-handed 310
Helix 91
91
C
542 546Right-handed 310
Helix 92
92
C
552 566Right-handed alpha
Helix 93
93
C
571 585Right-handed alpha
Helix 94
94
C
611 625Right-handed alpha
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There are 6 sheets in PDB entry 1GSZ. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 37first strand
Strand 2
A
605 609anti-parallel
Strand 3
A
598 601anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 296first strand
Strand 2
A
302 304anti-parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 37first strand
Strand 2
B
605 609anti-parallel
Strand 3
B
598 601anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
294 296first strand
Strand 2
B
302 304anti-parallel
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There are 3 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
36 37first strand
Strand 2
C
605 609anti-parallel
Strand 3
C
598 601anti-parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
294 297first strand
Strand 2
C
301 304anti-parallel
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