Analysis of interatomic Contacts of Structural Units in PDB entry:
1GU6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1GU6 entry

There are 4 chains in PDB entry 1GU6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 38	GLN 478
C	VAL 38	GLN 478
E	VAL 38	GLN 478
G	VAL 38	GLN 478

There are112 helices in PDB entry 1GU6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	41	46	Right-handed 310
Helix 2	2	A	49	58	Right-handed alpha
Helix 3	3	A	59	62	Right-handed 310
Helix 4	4	A	67	72	Right-handed alpha
Helix 5	5	A	73	79	Right-handed alpha
Helix 6	6	A	82	86	Right-handed 310
Helix 7	7	A	93	95	Right-handed 310
Helix 8	8	A	96	104	Right-handed alpha
Helix 9	9	A	105	108	Right-handed 310
Helix 10	10	A	120	124	Right-handed 310
Helix 11	11	A	128	144	Right-handed alpha
Helix 12	12	A	147	151	Right-handed 310
Helix 13	13	A	159	164	Right-handed alpha
Helix 14	14	A	168	173	Right-handed alpha
Helix 15	15	A	182	192	Right-handed alpha
Helix 16	16	A	195	199	Right-handed 310
Helix 17	17	A	200	210	Right-handed alpha
Helix 18	18	A	234	245	Right-handed alpha
Helix 19	19	A	265	273	Right-handed alpha
Helix 20	20	A	273	278	Right-handed alpha
Helix 21	21	A	281	287	Right-handed alpha
Helix 22	22	A	305	317	Right-handed 310
Helix 23	23	A	321	360	Right-handed alpha
Helix 24	24	A	363	386	Right-handed alpha
Helix 25	25	A	389	394	Right-handed alpha
Helix 26	26	A	394	422	Right-handed alpha
Helix 27	27	A	436	444	Right-handed alpha
Helix 28	28	A	447	473	Right-handed alpha
Helix 29	29	C	41	46	Right-handed 310
Helix 30	30	C	49	58	Right-handed alpha
Helix 31	31	C	59	62	Right-handed 310
Helix 32	32	C	67	72	Right-handed alpha
Helix 33	33	C	73	79	Right-handed alpha
Helix 34	34	C	82	86	Right-handed 310
Helix 35	35	C	93	95	Right-handed 310
Helix 36	36	C	96	104	Right-handed alpha
Helix 37	37	C	105	108	Right-handed 310
Helix 38	38	C	120	124	Right-handed 310
Helix 39	39	C	128	144	Right-handed alpha
Helix 40	40	C	146	151	Right-handed alpha
Helix 41	41	C	159	164	Right-handed alpha
Helix 42	42	C	168	173	Right-handed alpha
Helix 43	43	C	182	192	Right-handed alpha
Helix 44	44	C	195	199	Right-handed 310
Helix 45	45	C	200	210	Right-handed alpha
Helix 46	46	C	234	245	Right-handed alpha
Helix 47	47	C	265	273	Right-handed alpha
Helix 48	48	C	273	278	Right-handed alpha
Helix 49	49	C	281	287	Right-handed alpha
Helix 50	50	C	305	317	Right-handed 310
Helix 51	51	C	321	360	Right-handed alpha
Helix 52	52	C	363	386	Right-handed alpha
Helix 53	53	C	389	394	Right-handed alpha
Helix 54	54	C	394	423	Right-handed alpha
Helix 55	55	C	436	444	Right-handed alpha
Helix 56	56	C	447	473	Right-handed alpha
Helix 57	57	E	41	46	Right-handed 310
Helix 58	58	E	49	58	Right-handed alpha
Helix 59	59	E	59	62	Right-handed 310
Helix 60	60	E	67	72	Right-handed alpha
Helix 61	61	E	73	79	Right-handed alpha
Helix 62	62	E	82	86	Right-handed 310
Helix 63	63	E	93	95	Right-handed 310
Helix 64	64	E	96	104	Right-handed alpha
Helix 65	65	E	105	108	Right-handed 310
Helix 66	66	E	120	124	Right-handed 310
Helix 67	67	E	128	144	Right-handed alpha
Helix 68	68	E	146	151	Right-handed alpha
Helix 69	69	E	159	164	Right-handed alpha
Helix 70	70	E	168	173	Right-handed alpha
Helix 71	71	E	182	192	Right-handed alpha
Helix 72	72	E	195	199	Right-handed 310
Helix 73	73	E	200	210	Right-handed alpha
Helix 74	74	E	234	245	Right-handed alpha
Helix 75	75	E	265	273	Right-handed alpha
Helix 76	76	E	273	278	Right-handed alpha
Helix 77	77	E	281	287	Right-handed alpha
Helix 78	78	E	305	317	Right-handed 310
Helix 79	79	E	321	360	Right-handed alpha
Helix 80	80	E	363	386	Right-handed alpha
Helix 81	81	E	389	394	Right-handed alpha
Helix 82	82	E	394	422	Right-handed alpha
Helix 83	83	E	436	444	Right-handed alpha
Helix 84	84	E	447	473	Right-handed alpha
Helix 85	85	G	41	46	Right-handed 310
Helix 86	86	G	49	58	Right-handed alpha
Helix 87	87	G	59	62	Right-handed 310
Helix 88	88	G	67	72	Right-handed alpha
Helix 89	89	G	73	79	Right-handed alpha
Helix 90	90	G	82	86	Right-handed 310
Helix 91	91	G	93	95	Right-handed 310
Helix 92	92	G	96	104	Right-handed alpha
Helix 93	93	G	105	108	Right-handed 310
Helix 94	94	G	120	124	Right-handed 310
Helix 95	95	G	127	144	Right-handed alpha
Helix 96	96	G	147	151	Right-handed 310
Helix 97	97	G	159	164	Right-handed alpha
Helix 98	98	G	168	173	Right-handed alpha
Helix 99	99	G	182	192	Right-handed alpha
Helix 100	100	G	195	199	Right-handed 310
Helix 101	101	G	200	210	Right-handed alpha
Helix 102	102	G	234	245	Right-handed alpha
Helix 103	103	G	265	273	Right-handed alpha
Helix 104	104	G	273	278	Right-handed alpha
Helix 105	105	G	281	287	Right-handed alpha
Helix 106	106	G	305	317	Right-handed 310
Helix 107	107	G	321	360	Right-handed alpha
Helix 108	108	G	363	386	Right-handed alpha
Helix 109	109	G	389	394	Right-handed alpha
Helix 110	110	G	394	423	Right-handed alpha
Helix 111	111	G	436	444	Right-handed alpha
Helix 112	112	G	447	473	Right-handed alpha

There are 12 sheets in PDB entry 1GU6. Click on sheet of interest to get list of strands forming it: AA, AB, AC, CA, CB, CC, EA, EB, EC, GA, GB, GC,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	217	219	first strand
Strand 2	A	224	226	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	250	251	first strand
Strand 2	A	258	259	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	291	first strand
Strand 2	A	297	299	anti-parallel

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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	217	219	first strand
Strand 2	C	224	226	anti-parallel

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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	251	first strand
Strand 2	C	258	259	anti-parallel

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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	289	291	first strand
Strand 2	C	297	299	anti-parallel

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There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	217	219	first strand
Strand 2	E	224	226	anti-parallel

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There are 2 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	250	251	first strand
Strand 2	E	258	259	anti-parallel

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There are 2 strands in EC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	289	291	first strand
Strand 2	E	297	299	anti-parallel

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There are 2 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	217	219	first strand
Strand 2	G	224	226	anti-parallel

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There are 2 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	250	251	first strand
Strand 2	G	258	259	anti-parallel

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There are 2 strands in GC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	289	291	first strand
Strand 2	G	297	299	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1GU6

Analysis of interatomic Contacts of Structural Units in PDB entry:
1GU6