Analysis of interatomic Contacts of Structural Units in PDB entry:
1GVE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GVE entry

There are 2 chains in PDB entry 1GVE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 4ARG 327
B
 ALA 4ARG 327
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 1GVE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 34Right-handed alpha
Helix 2
2
A
44 47Right-handed 310
Helix 3
3
A
48 55Right-handed alpha
Helix 4
4
A
83 98Right-handed alpha
Helix 5
5
A
116 130Right-handed alpha
Helix 6
6
A
142 157Right-handed alpha
Helix 7
7
A
173 177Right-handed 310
Helix 8
8
A
178 187Right-handed alpha
Helix 9
9
A
196 203Right-handed 310
Helix 10
10
A
206 212Right-handed 310
Helix 11
11
A
224 233Right-handed alpha
Helix 12
12
A
234 253Right-handed alpha
Helix 13
13
A
258 270Right-handed alpha
Helix 14
14
A
274 278Right-handed 310
Helix 15
15
A
287 298Right-handed alpha
Helix 16
16
A
304 319Right-handed alpha
Helix 17
17
A
320 322Right-handed 310
Helix 18
18
B
20 34Right-handed alpha
Helix 19
19
B
44 47Right-handed 310
Helix 20
20
B
48 56Right-handed alpha
Helix 21
21
B
83 99Right-handed alpha
Helix 22
22
B
116 130Right-handed alpha
Helix 23
23
B
142 157Right-handed alpha
Helix 24
24
B
173 177Right-handed 310
Helix 25
25
B
178 187Right-handed alpha
Helix 26
26
B
196 203Right-handed 310
Helix 27
27
B
234 253Right-handed alpha
Helix 28
28
B
254 256Right-handed 310
Helix 29
29
B
258 270Right-handed alpha
Helix 30
30
B
274 278Right-handed 310
Helix 31
31
B
287 299Right-handed alpha
Helix 32
32
B
304 319Right-handed alpha
Helix 33
33
B
320 322Right-handed 310
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There are 2 sheets in PDB entry 1GVE. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 11first strand
Strand 2
A
280 283parallel
Strand 3
A
189 193parallel
Strand 4
A
161 167parallel
Strand 5
A
133 139parallel
Strand 6
A
103 108parallel
Strand 7
A
69 74parallel
Strand 8
A
38 40parallel
Strand 9
A
7 11parallel
Strand 10
A
7 11first strand
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There are 10 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 11first strand
Strand 2
B
280 283parallel
Strand 3
B
189 193parallel
Strand 4
B
161 167parallel
Strand 5
B
133 139parallel
Strand 6
B
103 108parallel
Strand 7
B
69 74parallel
Strand 8
B
38 40parallel
Strand 9
B
7 11parallel
Strand 10
B
7 11first strand
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