Analysis of interatomic Contacts of Structural Units in PDB entry:
1GWF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GWF entry

There are 6 chains in PDB entry 1GWF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6ARG 52
A
 ASN 54PRO 143
A
 LYS 145THR 165
A
 GLN 167LEU 184
A
 GLY 186GLN 375
A
 TRP 377ILE 503
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 1GWF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 51Right-handed alpha
Helix 2
2
A
83 87Right-handed 310
Helix 3
3
A
142 144Right-handed 310
Helix 4
4
A
145 153Right-handed alpha
Helix 5
5
A
163 174Right-handed alpha
Helix 6
6
A
177 186Right-handed alpha
Helix 7
7
A
187 190Right-handed 310
Helix 8
8
A
193 197Right-handed 310
Helix 9
9
A
231 242Right-handed alpha
Helix 10
10
A
244 256Right-handed alpha
Helix 11
11
A
272 277Right-handed alpha
Helix 12
12
A
309 314Right-handed alpha
Helix 13
13
A
333 351Right-handed alpha
Helix 14
14
A
354 358Right-handed 310
Helix 15
15
A
358 362Right-handed 310
Helix 16
16
A
427 437Right-handed alpha
Helix 17
17
A
439 455Right-handed alpha
Helix 18
18
A
458 473Right-handed alpha
Helix 19
19
A
473 486Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 1GWF.

There are 12 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 73first strand
Strand 2
A
91 99anti-parallel
Strand 3
A
116 123anti-parallel
Strand 4
A
126 133anti-parallel
Strand 5
A
199 200anti-parallel
Strand 6
A
214 223anti-parallel
Strand 7
A
261 270anti-parallel
Strand 8
A
296 305anti-parallel
Strand 9
A
64 73anti-parallel
Strand 10
A
91 99anti-parallel
Strand 11
A
116 123anti-parallel
Strand 12
A
64 73first strand
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