Analysis of interatomic Contacts of Structural Units in PDB entry:
1GWZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GWZ entry

There is 1 chain in PDB entry 1GWZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 250LYS 532
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1GWZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
A1
A
266 275Right-handed alpha
Helix 2
A2
A
331 343Right-handed alpha
Helix 3
A3
A
432 442Right-handed alpha
Helix 4
A4
A
461 478Right-handed alpha
Helix 5
A5
A
486 494Right-handed alpha
Helix 6
A6
A
504 523Right-handed alpha
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There are 2 sheets in PDB entry 1GWZ. Click on sheet of interest to get list of strands forming it: S1, S2,

There are 10 strands in S1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 289first strand
Strand 2
A
306 310anti-parallel
Strand 3
A
321 327anti-parallel
Strand 4
A
451 454parallel
Strand 5
A
347 353parallel
Strand 6
A
409 417parallel
Strand 7
A
392 399anti-parallel
Strand 8
A
385 389anti-parallel
Strand 9
A
380 383parallel
Strand 10
A
372 375anti-parallel
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There are 2 strands in S2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 357first strand
Strand 2
A
360 362anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il