Analysis of interatomic Contacts of Structural Units in PDB entry:
1GXJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GXJ entry

There are 2 chains in PDB entry 1GXJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 498GLU 658
B
 TYR 496ARG 657
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 1GXJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
500 509Right-handed alpha
Helix 2
2
A
510 513Right-handed 310
Helix 3
3
A
520 524Right-handed alpha
Helix 4
4
A
527 529Right-handed 310
Helix 5
5
A
530 539Right-handed alpha
Helix 6
6
A
540 543Right-handed 310
Helix 7
7
A
549 564Right-handed alpha
Helix 8
8
A
585 589Right-handed 310
Helix 9
9
A
596 600Right-handed alpha
Helix 10
10
A
603 605Right-handed 310
Helix 11
11
A
606 615Right-handed alpha
Helix 12
12
A
622 634Right-handed alpha
Helix 13
13
B
500 509Right-handed alpha
Helix 14
14
B
510 513Right-handed 310
Helix 15
15
B
520 524Right-handed alpha
Helix 16
16
B
527 539Right-handed alpha
Helix 17
17
B
540 543Right-handed 310
Helix 18
18
B
549 564Right-handed alpha
Helix 19
19
B
585 589Right-handed 310
Helix 20
20
B
596 600Right-handed alpha
Helix 21
21
B
603 606Right-handed 310
Helix 22
22
B
607 615Right-handed alpha
Helix 23
23
B
622 633Right-handed alpha
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There are 3 sheets in PDB entry 1GXJ. Click on sheet of interest to get list of strands forming it: AA, AB, BA,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
516 519first strand
Strand 2
A
545 547anti-parallel
Strand 3
A
568 572parallel
Strand 4
B
653 655anti-parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 595first strand
Strand 2
A
618 620anti-parallel
Strand 3
A
639 641parallel
Strand 4
A
646 647anti-parallel
Strand 5
A
653 657anti-parallel
Strand 6
B
566 572anti-parallel
Strand 7
B
545 547parallel
Strand 8
B
516 519anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
592 595first strand
Strand 2
B
618 620anti-parallel
Strand 3
B
639 641parallel
Strand 4
B
646 647anti-parallel
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