Analysis of interatomic Contacts of Structural Units in PDB entry:
1GZ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GZ0 entry

There are 8 chains in PDB entry 1GZ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2SER 243
B
 HIS -1SER 243
C
 SER 2SER 243
D
 HIS -1SER 243
E
 ARG 78SER 243
F
 SER -10SER 243
G
 ARG 78SER 243
H
 LEU -7SER 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 95 helices in PDB entry 1GZ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 17Right-handed alpha
Helix 2
2
A
18 20Right-handed 310
Helix 3
3
A
36 47Right-handed alpha
Helix 4
4
A
55 61Right-handed alpha
Helix 5
5
A
81 83Right-handed 310
Helix 6
6
A
84 91Right-handed alpha
Helix 7
7
A
105 120Right-handed alpha
Helix 8
8
A
135 143Right-handed alpha
Helix 9
9
A
144 149Right-handed alpha
Helix 10
10
A
156 167Right-handed alpha
Helix 11
11
A
183 185Right-handed 310
Helix 12
12
A
203 209Right-handed alpha
Helix 13
13
A
226 242Right-handed alpha
Helix 14
14
B
7 16Right-handed alpha
Helix 15
15
B
18 20Right-handed 310
Helix 16
16
B
36 45Right-handed alpha
Helix 17
17
B
54 61Right-handed alpha
Helix 18
18
B
81 83Right-handed 310
Helix 19
19
B
84 91Right-handed alpha
Helix 20
20
B
105 120Right-handed alpha
Helix 21
21
B
135 142Right-handed alpha
Helix 22
22
B
144 148Right-handed 310
Helix 23
23
B
156 166Right-handed alpha
Helix 24
24
B
182 185Right-handed 310
Helix 25
25
B
203 209Right-handed alpha
Helix 26
26
B
226 242Right-handed alpha
Helix 27
27
C
7 18Right-handed alpha
Helix 28
28
C
36 47Right-handed alpha
Helix 29
29
C
55 62Right-handed alpha
Helix 30
30
C
81 83Right-handed 310
Helix 31
31
C
84 92Right-handed alpha
Helix 32
32
C
105 120Right-handed alpha
Helix 33
33
C
135 142Right-handed alpha
Helix 34
34
C
144 148Right-handed 310
Helix 35
35
C
156 167Right-handed alpha
Helix 36
36
C
182 185Right-handed 310
Helix 37
37
C
203 208Right-handed alpha
Helix 38
38
C
226 242Right-handed alpha
Helix 39
39
D
7 18Right-handed alpha
Helix 40
40
D
36 45Right-handed alpha
Helix 41
41
D
54 62Right-handed alpha
Helix 42
42
D
81 83Right-handed 310
Helix 43
43
D
84 91Right-handed alpha
Helix 44
44
D
105 120Right-handed alpha
Helix 45
45
D
135 142Right-handed alpha
Helix 46
46
D
144 148Right-handed 310
Helix 47
47
D
156 167Right-handed alpha
Helix 48
48
D
182 185Right-handed 310
Helix 49
49
D
203 209Right-handed alpha
Helix 50
50
D
226 243Right-handed alpha
Helix 51
51
E
81 83Right-handed 310
Helix 52
52
E
84 91Right-handed alpha
Helix 53
53
E
105 120Right-handed alpha
Helix 54
54
E
135 142Right-handed alpha
Helix 55
55
E
144 149Right-handed alpha
Helix 56
56
E
156 167Right-handed alpha
Helix 57
57
E
182 185Right-handed 310
Helix 58
58
E
203 209Right-handed alpha
Helix 59
59
E
226 243Right-handed alpha
Helix 60
60
F
7 12Right-handed alpha
Helix 61
61
F
12 18Right-handed alpha
Helix 62
62
F
36 46Right-handed alpha
Helix 63
63
F
54 61Right-handed alpha
Helix 64
64
F
81 83Right-handed 310
Helix 65
65
F
84 91Right-handed alpha
Helix 66
66
F
105 120Right-handed alpha
Helix 67
67
F
129 131Right-handed 310
Helix 68
68
F
135 142Right-handed alpha
Helix 69
69
F
144 149Right-handed alpha
Helix 70
70
F
156 167Right-handed alpha
Helix 71
71
F
182 185Right-handed 310
Helix 72
72
F
203 209Right-handed alpha
Helix 73
73
F
226 242Right-handed alpha
Helix 74
74
G
81 83Right-handed 310
Helix 75
75
G
84 91Right-handed alpha
Helix 76
76
G
105 120Right-handed alpha
Helix 77
77
G
135 142Right-handed alpha
Helix 78
78
G
144 149Right-handed alpha
Helix 79
79
G
156 167Right-handed alpha
Helix 80
80
G
182 185Right-handed 310
Helix 81
81
G
203 209Right-handed alpha
Helix 82
82
G
226 242Right-handed alpha
Helix 83
83
H
7 18Right-handed alpha
Helix 84
84
H
35 47Right-handed alpha
Helix 85
85
H
54 62Right-handed alpha
Helix 86
86
H
81 83Right-handed 310
Helix 87
87
H
84 92Right-handed alpha
Helix 88
88
H
105 120Right-handed alpha
Helix 89
89
H
129 131Right-handed 310
Helix 90
90
H
135 142Right-handed alpha
Helix 91
91
H
144 148Right-handed 310
Helix 92
92
H
156 167Right-handed alpha
Helix 93
93
H
182 185Right-handed 310
Helix 94
94
H
203 208Right-handed alpha
Helix 95
95
H
226 243Right-handed alpha
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There are 14 sheets in PDB entry 1GZ0. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, A, DB, EA, FA, FB, GA, HA, HB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
70 74anti-parallel
Strand 3
A
22 28anti-parallel
Strand 4
A
49 53parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 154first strand
Strand 2
A
123 127parallel
Strand 3
A
96 101parallel
Strand 4
A
191 196parallel
Strand 5
A
170 174parallel
Strand 6
A
212 215parallel
Strand 7
A
180 181parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 6first strand
Strand 2
B
70 74anti-parallel
Strand 3
B
22 28anti-parallel
Strand 4
B
50 53parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 154first strand
Strand 2
B
123 127parallel
Strand 3
B
96 101parallel
Strand 4
B
191 196parallel
Strand 5
B
170 174parallel
Strand 6
B
212 214parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 6first strand
Strand 2
C
70 74anti-parallel
Strand 3
C
22 28anti-parallel
Strand 4
C
49 53parallel
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There are 6 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
151 154first strand
Strand 2
C
123 127parallel
Strand 3
C
96 101parallel
Strand 4
C
191 196parallel
Strand 5
C
170 174parallel
Strand 6
C
212 214parallel
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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 6first strand
Strand 2
D
70 74anti-parallel
Strand 3
D
22 28anti-parallel
Strand 4
D
50 53parallel
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There are 6 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
151 154first strand
Strand 2
D
123 127parallel
Strand 3
D
96 101parallel
Strand 4
D
191 196parallel
Strand 5
D
170 174parallel
Strand 6
D
212 214parallel
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There are 6 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
151 154first strand
Strand 2
E
123 127parallel
Strand 3
E
96 101parallel
Strand 4
E
191 196parallel
Strand 5
E
170 174parallel
Strand 6
E
212 214parallel
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There are 4 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
3 4first strand
Strand 2
F
73 74anti-parallel
Strand 3
F
22 28anti-parallel
Strand 4
F
49 53parallel
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There are 6 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
151 154first strand
Strand 2
F
123 127parallel
Strand 3
F
96 101parallel
Strand 4
F
191 196parallel
Strand 5
F
170 174parallel
Strand 6
F
212 214parallel
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There are 6 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
151 154first strand
Strand 2
G
123 127parallel
Strand 3
G
96 101parallel
Strand 4
G
191 196parallel
Strand 5
G
170 174parallel
Strand 6
G
212 214parallel
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There are 4 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
70 74anti-parallel
Strand 3
H
22 28anti-parallel
Strand 4
H
49 53parallel
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There are 6 strands in HB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
151 154first strand
Strand 2
H
123 127parallel
Strand 3
H
96 101parallel
Strand 4
H
191 196parallel
Strand 5
H
170 174parallel
Strand 6
H
212 214parallel
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