Analysis of interatomic Contacts of Structural Units in PDB entry:
1GZ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GZ5 entry

There are 4 chains in PDB entry 1GZ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1ARG 456
B
 SER 1ARG 456
C
 SER 1ARG 456
D
 SER 1ARG 456
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are100 helices in PDB entry 1GZ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 18Right-handed 310
Helix 2
2
A
21 35Right-handed alpha
Helix 3
3
A
68 76Right-handed alpha
Helix 4
4
A
78 83Right-handed alpha
Helix 5
5
A
83 89Right-handed alpha
Helix 6
6
A
91 95Right-handed 310
Helix 7
7
A
98 117Right-handed alpha
Helix 8
8
A
118 120Right-handed 310
Helix 9
9
A
131 134Right-handed 310
Helix 10
10
A
135 143Right-handed alpha
Helix 11
11
A
159 164Right-handed alpha
Helix 12
12
A
168 177Right-handed alpha
Helix 13
13
A
186 201Right-handed alpha
Helix 14
14
A
228 238Right-handed alpha
Helix 15
15
A
241 251Right-handed alpha
Helix 16
16
A
264 267Right-handed 310
Helix 17
17
A
268 283Right-handed alpha
Helix 18
18
A
284 287Right-handed 310
Helix 19
19
A
303 325Right-handed alpha
Helix 20
20
A
340 351Right-handed alpha
Helix 21
21
A
364 374Right-handed alpha
Helix 22
22
A
389 393Right-handed 310
Helix 23
23
A
404 417Right-handed alpha
Helix 24
24
A
419 437Right-handed alpha
Helix 25
25
A
438 452Right-handed alpha
Helix 26
26
B
14 18Right-handed 310
Helix 27
27
B
21 35Right-handed alpha
Helix 28
28
B
68 76Right-handed alpha
Helix 29
29
B
78 83Right-handed alpha
Helix 30
30
B
83 89Right-handed alpha
Helix 31
31
B
91 95Right-handed 310
Helix 32
32
B
98 117Right-handed alpha
Helix 33
33
B
118 120Right-handed 310
Helix 34
34
B
131 134Right-handed 310
Helix 35
35
B
135 143Right-handed alpha
Helix 36
36
B
159 164Right-handed alpha
Helix 37
37
B
168 177Right-handed alpha
Helix 38
38
B
186 201Right-handed alpha
Helix 39
39
B
228 238Right-handed alpha
Helix 40
40
B
241 251Right-handed alpha
Helix 41
41
B
264 267Right-handed 310
Helix 42
42
B
268 283Right-handed alpha
Helix 43
43
B
284 287Right-handed 310
Helix 44
44
B
303 325Right-handed alpha
Helix 45
45
B
340 351Right-handed alpha
Helix 46
46
B
364 373Right-handed alpha
Helix 47
47
B
389 393Right-handed 310
Helix 48
48
B
404 417Right-handed alpha
Helix 49
49
B
419 437Right-handed alpha
Helix 50
50
B
438 452Right-handed alpha
Helix 51
51
C
14 18Right-handed 310
Helix 52
52
C
21 35Right-handed alpha
Helix 53
53
C
68 76Right-handed alpha
Helix 54
54
C
78 83Right-handed alpha
Helix 55
55
C
83 89Right-handed alpha
Helix 56
56
C
91 95Right-handed 310
Helix 57
57
C
98 117Right-handed alpha
Helix 58
58
C
118 120Right-handed 310
Helix 59
59
C
131 134Right-handed 310
Helix 60
60
C
135 143Right-handed alpha
Helix 61
61
C
159 164Right-handed alpha
Helix 62
62
C
168 177Right-handed alpha
Helix 63
63
C
186 201Right-handed alpha
Helix 64
64
C
228 238Right-handed alpha
Helix 65
65
C
241 251Right-handed alpha
Helix 66
66
C
264 267Right-handed 310
Helix 67
67
C
268 283Right-handed alpha
Helix 68
68
C
284 287Right-handed 310
Helix 69
69
C
303 325Right-handed alpha
Helix 70
70
C
364 374Right-handed alpha
Helix 71
71
C
389 393Right-handed 310
Helix 72
72
C
404 417Right-handed alpha
Helix 73
73
C
419 437Right-handed alpha
Helix 74
74
C
438 452Right-handed alpha
Helix 75
75
D
14 18Right-handed 310
Helix 76
76
D
21 35Right-handed alpha
Helix 77
77
D
68 76Right-handed alpha
Helix 78
78
D
78 83Right-handed alpha
Helix 79
79
D
83 89Right-handed alpha
Helix 80
80
D
91 95Right-handed 310
Helix 81
81
D
98 117Right-handed alpha
Helix 82
82
D
118 120Right-handed 310
Helix 83
83
D
131 134Right-handed 310
Helix 84
84
D
135 143Right-handed alpha
Helix 85
85
D
159 164Right-handed alpha
Helix 86
86
D
168 177Right-handed alpha
Helix 87
87
D
186 201Right-handed alpha
Helix 88
88
D
228 237Right-handed alpha
Helix 89
89
D
241 251Right-handed alpha
Helix 90
90
D
264 267Right-handed 310
Helix 91
91
D
268 283Right-handed alpha
Helix 92
92
D
284 287Right-handed 310
Helix 93
93
D
303 325Right-handed alpha
Helix 94
94
D
340 350Right-handed alpha
Helix 95
95
D
364 374Right-handed alpha
Helix 96
96
D
389 393Right-handed 310
Helix 97
97
D
404 417Right-handed alpha
Helix 98
98
D
419 429Right-handed alpha
Helix 99
99
D
431 437Right-handed alpha
Helix 100
100
D
438 452Right-handed alpha
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There are 8 sheets in PDB entry 1GZ5. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, DA, DB,

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 57first strand
Strand 2
A
60 67anti-parallel
Strand 3
A
36 45parallel
Strand 4
A
3 6parallel
Strand 5
A
125 129parallel
Strand 6
A
149 152parallel
Strand 7
A
181 184parallel
Strand 8
A
216 222parallel
Strand 9
A
210 213anti-parallel
Strand 10
A
203 207anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 335first strand
Strand 2
A
290 295parallel
Strand 3
A
255 260parallel
Strand 4
A
353 356parallel
Strand 5
A
381 385parallel
Strand 6
A
398 400parallel
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There are 10 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 57first strand
Strand 2
B
60 67anti-parallel
Strand 3
B
36 45parallel
Strand 4
B
3 7parallel
Strand 5
B
125 129parallel
Strand 6
B
148 152parallel
Strand 7
B
181 184parallel
Strand 8
B
216 222parallel
Strand 9
B
210 213anti-parallel
Strand 10
B
203 205anti-parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
332 335first strand
Strand 2
B
290 295parallel
Strand 3
B
255 260parallel
Strand 4
B
353 356parallel
Strand 5
B
381 385parallel
Strand 6
B
398 400parallel
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There are 10 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 57first strand
Strand 2
C
60 67anti-parallel
Strand 3
C
36 45parallel
Strand 4
C
3 7parallel
Strand 5
C
125 129parallel
Strand 6
C
148 152parallel
Strand 7
C
181 184parallel
Strand 8
C
216 222parallel
Strand 9
C
210 213anti-parallel
Strand 10
C
203 207anti-parallel
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There are 6 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
332 335first strand
Strand 2
C
290 295parallel
Strand 3
C
255 260parallel
Strand 4
C
353 356parallel
Strand 5
C
381 385parallel
Strand 6
C
398 400parallel
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There are 10 strands in DA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 57first strand
Strand 2
D
60 67anti-parallel
Strand 3
D
36 45parallel
Strand 4
D
3 7parallel
Strand 5
D
125 129parallel
Strand 6
D
148 152parallel
Strand 7
D
181 184parallel
Strand 8
D
216 222parallel
Strand 9
D
210 213anti-parallel
Strand 10
D
203 205anti-parallel
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There are 6 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
332 335first strand
Strand 2
D
290 295parallel
Strand 3
D
255 260parallel
Strand 4
D
353 356parallel
Strand 5
D
381 385parallel
Strand 6
D
398 400parallel
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