Analysis of interatomic Contacts of Structural Units in PDB entry:
1GZ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GZ6 entry

There are 4 chains in PDB entry 1GZ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3SER 304
B
 SER 3SER 304
C
 PRO 4SER 304
D
 SER 3SER 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 1GZ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 32Right-handed alpha
Helix 2
2
A
52 65Right-handed alpha
Helix 3
3
A
75 77Right-handed 310
Helix 4
4
A
78 90Right-handed alpha
Helix 5
5
A
107 111Right-handed 310
Helix 6
6
A
112 142Right-handed alpha
Helix 7
7
A
151 157Right-handed alpha
Helix 8
8
A
161 182Right-handed alpha
Helix 9
9
A
183 185Right-handed 310
Helix 10
10
A
201 205Right-handed 310
Helix 11
11
A
206 213Right-handed alpha
Helix 12
12
A
214 217Right-handed 310
Helix 13
13
A
218 226Right-handed alpha
Helix 14
14
A
265 272Right-handed alpha
Helix 15
15
A
272 277Right-handed alpha
Helix 16
16
A
287 303Right-handed alpha
Helix 17
17
B
19 31Right-handed alpha
Helix 18
18
B
52 65Right-handed alpha
Helix 19
19
B
75 77Right-handed 310
Helix 20
20
B
78 91Right-handed alpha
Helix 21
21
B
107 111Right-handed 310
Helix 22
22
B
112 142Right-handed alpha
Helix 23
23
B
151 157Right-handed alpha
Helix 24
24
B
161 183Right-handed alpha
Helix 25
25
B
214 217Right-handed 310
Helix 26
26
B
218 226Right-handed alpha
Helix 27
27
B
265 272Right-handed alpha
Helix 28
28
B
272 278Right-handed alpha
Helix 29
29
B
287 303Right-handed alpha
Helix 30
30
C
19 32Right-handed alpha
Helix 31
31
C
52 66Right-handed alpha
Helix 32
32
C
75 77Right-handed 310
Helix 33
33
C
78 91Right-handed alpha
Helix 34
34
C
107 111Right-handed 310
Helix 35
35
C
112 142Right-handed alpha
Helix 36
36
C
151 157Right-handed alpha
Helix 37
37
C
161 183Right-handed alpha
Helix 38
38
C
208 213Right-handed alpha
Helix 39
39
C
214 217Right-handed 310
Helix 40
40
C
218 226Right-handed alpha
Helix 41
41
C
265 272Right-handed alpha
Helix 42
42
C
272 278Right-handed alpha
Helix 43
43
C
287 303Right-handed alpha
Helix 44
44
D
19 32Right-handed alpha
Helix 45
45
D
52 65Right-handed alpha
Helix 46
46
D
75 77Right-handed 310
Helix 47
47
D
78 90Right-handed alpha
Helix 48
48
D
107 111Right-handed 310
Helix 49
49
D
112 142Right-handed alpha
Helix 50
50
D
151 157Right-handed alpha
Helix 51
51
D
161 182Right-handed alpha
Helix 52
52
D
183 185Right-handed 310
Helix 53
53
D
201 205Right-handed 310
Helix 54
54
D
206 213Right-handed alpha
Helix 55
55
D
214 217Right-handed 310
Helix 56
56
D
218 226Right-handed alpha
Helix 57
57
D
265 272Right-handed alpha
Helix 58
58
D
272 277Right-handed alpha
Helix 59
59
D
287 303Right-handed alpha
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There are 4 sheets in PDB entry 1GZ6. Click on sheet of interest to get list of strands forming it: AA, AB, CA, CB,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 72first strand
Strand 2
A
35 39parallel
Strand 3
A
11 14parallel
Strand 4
A
95 98parallel
Strand 5
A
144 149parallel
Strand 6
A
187 195parallel
Strand 7
A
236 240parallel
Strand 8
A
243 251anti-parallel
Strand 9
B
255 256anti-parallel
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There are 9 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 72first strand
Strand 2
A
35 39parallel
Strand 3
A
11 14parallel
Strand 4
A
95 98parallel
Strand 5
A
144 149parallel
Strand 6
A
187 195parallel
Strand 7
A
236 240parallel
Strand 8
A
243 251anti-parallel
Strand 9
B
243 251anti-parallel
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There are 9 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
68 72first strand
Strand 2
C
35 39parallel
Strand 3
C
11 14parallel
Strand 4
C
95 98parallel
Strand 5
C
144 149parallel
Strand 6
C
187 195parallel
Strand 7
C
236 240parallel
Strand 8
C
243 251anti-parallel
Strand 9
D
255 256anti-parallel
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There are 9 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
68 72first strand
Strand 2
C
35 39parallel
Strand 3
C
11 14parallel
Strand 4
C
95 98parallel
Strand 5
C
144 149parallel
Strand 6
C
187 195parallel
Strand 7
C
236 240parallel
Strand 8
C
243 251anti-parallel
Strand 9
D
243 251anti-parallel
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