Analysis of interatomic Contacts of Structural Units in PDB entry:
1GZ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GZ7 entry

There are 4 chains in PDB entry 1GZ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1VAL 534
B
 ALA 1VAL 534
C
 ALA 1VAL 534
D
 ALA 1VAL 534
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are103 helices in PDB entry 1GZ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 37Right-handed 310
Helix 2
2
A
68 72Right-handed 310
Helix 3
3
A
74 85Right-handed alpha
Helix 4
4
A
135 145Right-handed alpha
Helix 5
5
A
158 164Right-handed alpha
Helix 6
6
A
166 173Right-handed alpha
Helix 7
7
A
176 193Right-handed alpha
Helix 8
8
A
194 196Right-handed 310
Helix 9
9
A
209 221Right-handed alpha
Helix 10
10
A
222 225Right-handed 310
Helix 11
11
A
252 266Right-handed alpha
Helix 12
12
A
273 280Right-handed alpha
Helix 13
13
A
282 291Right-handed alpha
Helix 14
14
A
318 325Right-handed alpha
Helix 15
15
A
342 347Right-handed alpha
Helix 16
16
A
348 350Right-handed 310
Helix 17
17
A
354 366Right-handed alpha
Helix 18
18
A
370 381Right-handed alpha
Helix 19
19
A
384 388Right-handed 310
Helix 20
20
A
402 415Right-handed alpha
Helix 21
21
A
415 426Right-handed alpha
Helix 22
22
A
450 458Right-handed alpha
Helix 23
23
A
463 468Right-handed alpha
Helix 24
24
A
468 478Right-handed alpha
Helix 25
25
A
479 484Right-handed 310
Helix 26
26
A
518 527Right-handed alpha
Helix 27
27
A
528 533Right-handed 310
Helix 28
28
B
33 37Right-handed 310
Helix 29
29
B
68 72Right-handed 310
Helix 30
30
B
74 85Right-handed alpha
Helix 31
31
B
135 145Right-handed alpha
Helix 32
32
B
158 164Right-handed alpha
Helix 33
33
B
166 173Right-handed alpha
Helix 34
34
B
176 193Right-handed alpha
Helix 35
35
B
194 196Right-handed 310
Helix 36
36
B
209 221Right-handed alpha
Helix 37
37
B
222 225Right-handed 310
Helix 38
38
B
252 267Right-handed alpha
Helix 39
39
B
273 280Right-handed alpha
Helix 40
40
B
282 292Right-handed alpha
Helix 41
41
B
318 325Right-handed alpha
Helix 42
42
B
342 347Right-handed alpha
Helix 43
43
B
354 366Right-handed alpha
Helix 44
44
B
370 381Right-handed alpha
Helix 45
45
B
384 388Right-handed 310
Helix 46
46
B
402 415Right-handed alpha
Helix 47
47
B
415 426Right-handed alpha
Helix 48
48
B
451 458Right-handed alpha
Helix 49
49
B
463 468Right-handed alpha
Helix 50
50
B
468 478Right-handed alpha
Helix 51
51
B
479 484Right-handed 310
Helix 52
52
B
518 527Right-handed alpha
Helix 53
53
B
528 533Right-handed 310
Helix 54
54
C
33 37Right-handed 310
Helix 55
55
C
74 84Right-handed alpha
Helix 56
56
C
135 145Right-handed alpha
Helix 57
57
C
158 164Right-handed alpha
Helix 58
58
C
166 173Right-handed alpha
Helix 59
59
C
176 193Right-handed alpha
Helix 60
60
C
194 196Right-handed 310
Helix 61
61
C
209 221Right-handed alpha
Helix 62
62
C
222 225Right-handed 310
Helix 63
63
C
252 267Right-handed alpha
Helix 64
64
C
273 280Right-handed alpha
Helix 65
65
C
282 291Right-handed alpha
Helix 66
66
C
318 325Right-handed alpha
Helix 67
67
C
342 347Right-handed alpha
Helix 68
68
C
348 350Right-handed 310
Helix 69
69
C
354 366Right-handed alpha
Helix 70
70
C
370 381Right-handed alpha
Helix 71
71
C
402 415Right-handed alpha
Helix 72
72
C
415 426Right-handed alpha
Helix 73
73
C
451 458Right-handed alpha
Helix 74
74
C
463 468Right-handed alpha
Helix 75
75
C
468 478Right-handed alpha
Helix 76
76
C
479 484Right-handed 310
Helix 77
77
C
518 527Right-handed alpha
Helix 78
78
C
528 533Right-handed 310
Helix 79
79
D
33 37Right-handed 310
Helix 80
80
D
74 85Right-handed alpha
Helix 81
81
D
135 145Right-handed alpha
Helix 82
82
D
158 164Right-handed alpha
Helix 83
83
D
166 173Right-handed alpha
Helix 84
84
D
176 193Right-handed alpha
Helix 85
85
D
194 196Right-handed 310
Helix 86
86
D
209 221Right-handed alpha
Helix 87
87
D
222 225Right-handed 310
Helix 88
88
D
252 267Right-handed alpha
Helix 89
89
D
273 280Right-handed alpha
Helix 90
90
D
282 292Right-handed alpha
Helix 91
91
D
318 325Right-handed alpha
Helix 92
92
D
342 347Right-handed alpha
Helix 93
93
D
348 350Right-handed 310
Helix 94
94
D
354 366Right-handed alpha
Helix 95
95
D
370 381Right-handed alpha
Helix 96
96
D
402 415Right-handed alpha
Helix 97
97
D
415 426Right-handed alpha
Helix 98
98
D
451 458Right-handed alpha
Helix 99
99
D
463 468Right-handed alpha
Helix 100
100
D
468 478Right-handed alpha
Helix 101
101
D
479 484Right-handed 310
Helix 102
102
D
518 527Right-handed alpha
Helix 103
103
D
528 533Right-handed 310
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There are 12 sheets in PDB entry 1GZ7. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, A, DB, C,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
11 13anti-parallel
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There are 11 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
21 27anti-parallel
Strand 3
A
99 104anti-parallel
Strand 4
A
150 154anti-parallel
Strand 5
A
114 120parallel
Strand 6
A
198 208parallel
Strand 7
A
236 240parallel
Strand 8
A
333 338parallel
Strand 9
A
431 436parallel
Strand 10
A
502 505parallel
Strand 11
A
510 513anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 228first strand
Strand 2
A
231 232anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 5first strand
Strand 2
B
11 13anti-parallel
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There are 11 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 16first strand
Strand 2
B
21 27anti-parallel
Strand 3
B
99 104anti-parallel
Strand 4
B
150 154anti-parallel
Strand 5
B
114 120parallel
Strand 6
B
198 208parallel
Strand 7
B
236 240parallel
Strand 8
B
333 338parallel
Strand 9
B
431 436parallel
Strand 10
B
502 505parallel
Strand 11
B
510 513anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 228first strand
Strand 2
B
231 232anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 5first strand
Strand 2
C
11 13anti-parallel
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There are 11 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 16first strand
Strand 2
C
21 27anti-parallel
Strand 3
C
99 104anti-parallel
Strand 4
C
150 154anti-parallel
Strand 5
C
114 120parallel
Strand 6
C
198 208parallel
Strand 7
C
236 240parallel
Strand 8
C
333 338parallel
Strand 9
C
431 436parallel
Strand 10
C
502 505parallel
Strand 11
C
510 513anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
227 228first strand
Strand 2
C
231 232anti-parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 5first strand
Strand 2
D
11 13anti-parallel
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There are 11 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
15 16first strand
Strand 2
D
21 27anti-parallel
Strand 3
D
99 104anti-parallel
Strand 4
D
150 154anti-parallel
Strand 5
D
114 120parallel
Strand 6
D
198 208parallel
Strand 7
D
236 240parallel
Strand 8
D
333 338parallel
Strand 9
D
431 436parallel
Strand 10
D
502 505parallel
Strand 11
D
510 513anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
227 228first strand
Strand 2
D
231 232anti-parallel
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