Analysis of interatomic Contacts of Structural Units in PDB entry:
1H17


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H17 entry

There is 1 chain in PDB entry 1H17 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1MET 759
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 1H17. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 11Right-handed alpha
Helix 2
2
A
17 21Right-handed 310
Helix 3
3
A
24 33Right-handed alpha
Helix 4
4
A
39 43Right-handed 310
Helix 5
5
A
47 68Right-handed alpha
Helix 6
6
A
110 114Right-handed 310
Helix 7
7
A
115 125Right-handed alpha
Helix 8
8
A
130 140Right-handed alpha
Helix 9
9
A
143 152Right-handed alpha
Helix 10
10
A
153 162Right-handed alpha
Helix 11
11
A
181 202Right-handed alpha
Helix 12
12
A
203 210Right-handed alpha
Helix 13
13
A
212 240Right-handed alpha
Helix 14
14
A
250 269Right-handed alpha
Helix 15
15
A
279 293Right-handed alpha
Helix 16
16
A
297 313Right-handed alpha
Helix 17
17
A
320 327Right-handed alpha
Helix 18
18
A
350 363Right-handed alpha
Helix 19
19
A
380 395Right-handed alpha
Helix 20
20
A
402 410Right-handed alpha
Helix 21
21
A
438 447Right-handed alpha
Helix 22
22
A
471 505Right-handed alpha
Helix 23
23
A
507 512Right-handed alpha
Helix 24
24
A
528 542Right-handed alpha
Helix 25
25
A
570 590Right-handed alpha
Helix 26
26
A
593 597Right-handed 310
Helix 27
27
A
607 615Right-handed alpha
Helix 28
28
A
643 653Right-handed alpha
Helix 29
29
A
655 659Right-handed 310
Helix 30
30
A
670 675Right-handed alpha
Helix 31
31
A
677 694Right-handed alpha
Helix 32
32
A
711 721Right-handed alpha
Helix 33
33
A
722 725Right-handed 310
Helix 34
34
A
740 742Right-handed 310
Helix 35
35
A
743 752Right-handed alpha
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There are 6 sheets in PDB entry 1H17. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 78first strand
Strand 2
A
106 109parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 339first strand
Strand 2
A
370 375parallel
Strand 3
A
398 401parallel
Strand 4
A
704 709anti-parallel
Strand 5
A
666 669parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 417first strand
Strand 2
A
421 424anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
428 437first strand
Strand 2
A
519 527parallel
Strand 3
A
598 603parallel
Strand 4
A
662 663parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
543 548first strand
Strand 2
A
554 560anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
729 731first strand
Strand 2
A
736 738anti-parallel
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