Analysis of interatomic Contacts of Structural Units in PDB entry:
1H29


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H29 entry

There are 4 chains in PDB entry 1H29 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 38ARG 543
B
 PRO 38LYS 541
C
 PRO 38ALA 544
D
 PRO 38GLU 542
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are100 helices in PDB entry 1H29. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
49 55Right-handed 310
Helix 2
2
A
66 75Right-handed alpha
Helix 3
3
A
79 83Right-handed 310
Helix 4
4
A
102 124Right-handed alpha
Helix 5
5
A
134 139Right-handed alpha
Helix 6
6
A
155 164Right-handed alpha
Helix 7
7
A
177 181Right-handed 310
Helix 8
8
A
201 205Right-handed 310
Helix 9
9
A
216 234Right-handed alpha
Helix 10
10
A
243 249Right-handed alpha
Helix 11
11
A
249 254Right-handed alpha
Helix 12
12
A
284 288Right-handed 310
Helix 13
13
A
298 305Right-handed alpha
Helix 14
14
A
335 342Right-handed alpha
Helix 15
15
A
348 357Right-handed alpha
Helix 16
16
A
359 367Right-handed alpha
Helix 17
17
A
374 382Right-handed alpha
Helix 18
18
A
402 415Right-handed alpha
Helix 19
19
A
425 429Right-handed 310
Helix 20
20
A
448 461Right-handed alpha
Helix 21
21
A
463 470Right-handed alpha
Helix 22
22
A
474 480Right-handed 310
Helix 23
23
A
492 496Right-handed 310
Helix 24
24
A
510 526Right-handed alpha
Helix 25
25
A
535 539Right-handed 310
Helix 26
26
B
49 55Right-handed 310
Helix 27
27
B
66 76Right-handed alpha
Helix 28
28
B
79 83Right-handed 310
Helix 29
29
B
102 124Right-handed alpha
Helix 30
30
B
134 139Right-handed alpha
Helix 31
31
B
155 164Right-handed alpha
Helix 32
32
B
177 181Right-handed 310
Helix 33
33
B
201 206Right-handed alpha
Helix 34
34
B
216 235Right-handed alpha
Helix 35
35
B
243 249Right-handed alpha
Helix 36
36
B
249 254Right-handed alpha
Helix 37
37
B
298 305Right-handed alpha
Helix 38
38
B
328 332Right-handed 310
Helix 39
39
B
335 342Right-handed alpha
Helix 40
40
B
348 357Right-handed alpha
Helix 41
41
B
359 367Right-handed alpha
Helix 42
42
B
374 382Right-handed alpha
Helix 43
43
B
390 396Right-handed alpha
Helix 44
44
B
402 417Right-handed alpha
Helix 45
45
B
425 429Right-handed 310
Helix 46
46
B
448 461Right-handed alpha
Helix 47
47
B
463 470Right-handed alpha
Helix 48
48
B
474 479Right-handed alpha
Helix 49
49
B
492 496Right-handed 310
Helix 50
50
B
510 527Right-handed alpha
Helix 51
51
B
535 539Right-handed 310
Helix 52
52
C
49 54Right-handed 310
Helix 53
53
C
66 76Right-handed alpha
Helix 54
54
C
79 83Right-handed 310
Helix 55
55
C
102 124Right-handed alpha
Helix 56
56
C
134 139Right-handed alpha
Helix 57
57
C
155 164Right-handed alpha
Helix 58
58
C
177 181Right-handed 310
Helix 59
59
C
201 205Right-handed 310
Helix 60
60
C
216 234Right-handed alpha
Helix 61
61
C
243 249Right-handed alpha
Helix 62
62
C
249 254Right-handed alpha
Helix 63
63
C
284 288Right-handed 310
Helix 64
64
C
298 305Right-handed alpha
Helix 65
65
C
335 342Right-handed alpha
Helix 66
66
C
348 357Right-handed alpha
Helix 67
67
C
359 367Right-handed alpha
Helix 68
68
C
374 382Right-handed alpha
Helix 69
69
C
397 401Right-handed 310
Helix 70
70
C
402 417Right-handed alpha
Helix 71
71
C
425 429Right-handed 310
Helix 72
72
C
448 461Right-handed alpha
Helix 73
73
C
463 470Right-handed alpha
Helix 74
74
C
475 480Right-handed 310
Helix 75
75
C
492 496Right-handed 310
Helix 76
76
C
510 526Right-handed alpha
Helix 77
77
C
535 539Right-handed 310
Helix 78
78
D
49 54Right-handed 310
Helix 79
79
D
66 76Right-handed alpha
Helix 80
80
D
79 83Right-handed 310
Helix 81
81
D
102 124Right-handed alpha
Helix 82
82
D
134 139Right-handed alpha
Helix 83
83
D
155 164Right-handed alpha
Helix 84
84
D
177 181Right-handed 310
Helix 85
85
D
201 205Right-handed 310
Helix 86
86
D
216 236Right-handed alpha
Helix 87
87
D
243 249Right-handed alpha
Helix 88
88
D
249 254Right-handed alpha
Helix 89
89
D
298 305Right-handed alpha
Helix 90
90
D
328 332Right-handed 310
Helix 91
91
D
335 342Right-handed alpha
Helix 92
92
D
348 357Right-handed alpha
Helix 93
93
D
374 379Right-handed alpha
Helix 94
94
D
402 417Right-handed alpha
Helix 95
95
D
425 429Right-handed 310
Helix 96
96
D
448 461Right-handed alpha
Helix 97
97
D
463 470Right-handed alpha
Helix 98
98
D
474 479Right-handed alpha
Helix 99
99
D
510 526Right-handed alpha
Helix 100
100
D
535 540Right-handed alpha
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There are 22 sheets in PDB entry 1H29. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, BA, BB, BC, BD, BE, BF, CA, CB, CC, CD, CE, A, DB, C, DD, DE,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 42first strand
Strand 2
A
146 147parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 48first strand
Strand 2
A
62 65anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 87first strand
Strand 2
A
90 91anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 186first strand
Strand 2
A
191 193anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 275first strand
Strand 2
A
294 297anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
433 435first strand
Strand 2
A
445 447anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 42first strand
Strand 2
B
146 147parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 48first strand
Strand 2
B
62 65anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 87first strand
Strand 2
B
90 91anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
184 186first strand
Strand 2
B
191 193anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
272 275first strand
Strand 2
B
294 297anti-parallel
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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
433 435first strand
Strand 2
B
445 447anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
41 42first strand
Strand 2
C
146 147parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 48first strand
Strand 2
C
62 65anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
184 186first strand
Strand 2
C
191 193anti-parallel
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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
272 275first strand
Strand 2
C
294 297anti-parallel
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There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
433 435first strand
Strand 2
C
445 447anti-parallel
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
41 42first strand
Strand 2
D
146 147parallel
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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
45 48first strand
Strand 2
D
62 65anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
184 186first strand
Strand 2
D
191 193anti-parallel
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There are 2 strands in DD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
272 275first strand
Strand 2
D
294 297anti-parallel
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There are 2 strands in DE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
433 435first strand
Strand 2
D
445 447anti-parallel
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