Analysis of interatomic Contacts of Structural Units in PDB entry:
1H30


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H30 entry

There is 1 chain in PDB entry 1H30 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 261ALA 678
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 1H30. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
263 266Right-handed 310
Helix 2
2
A
429 433Right-handed 310
Helix 3
3
A
465 469Right-handed 310
Helix 4
4
A
528 531Right-handed 310
Helix 5
5
A
600 616Right-handed alpha
Helix 6
6
A
654 658Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 1H30. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 271first strand
Strand 2
A
276 279anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 291first strand
Strand 2
A
470 471anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 296first strand
Strand 2
A
443 450anti-parallel
Strand 3
A
320 327anti-parallel
Strand 4
A
380 386anti-parallel
Strand 5
A
390 395anti-parallel
Strand 6
A
398 404anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 310first strand
Strand 2
A
420 423anti-parallel
Strand 3
A
332 338anti-parallel
Strand 4
A
344 351anti-parallel
Strand 5
A
354 361anti-parallel
Strand 6
A
364 373anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 413first strand
Strand 2
A
416 418anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
478 480first strand
Strand 2
A
642 648anti-parallel
Strand 3
A
507 515anti-parallel
Strand 4
A
575 582anti-parallel
Strand 5
A
585 590anti-parallel
Strand 6
A
593 594anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
478 480first strand
Strand 2
A
642 648anti-parallel
Strand 3
A
651 652anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
596 597first strand
Strand 2
A
560 566anti-parallel
Strand 3
A
552 557anti-parallel
Strand 4
A
532 540anti-parallel
Strand 5
A
520 527anti-parallel
Strand 6
A
620 623anti-parallel
Strand 7
A
486 488anti-parallel
Strand 8
A
660 661anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il