Analysis of interatomic Contacts of Structural Units in PDB entry:
1H4P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H4P entry

There are 2 chains in PDB entry 1H4P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 41ASN 448
B
 TYR 41ASN 448
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 37 helices in PDB entry 1H4P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
69 75Right-handed alpha
Helix 2
2
A
89 98Right-handed alpha
Helix 3
3
A
98 114Right-handed alpha
Helix 4
4
A
115 125Right-handed alpha
Helix 5
5
A
137 139Right-handed 310
Helix 6
6
A
151 166Right-handed alpha
Helix 7
7
A
184 188Right-handed 310
Helix 8
8
A
197 215Right-handed alpha
Helix 9
9
A
217 222Right-handed alpha
Helix 10
10
A
234 238Right-handed 310
Helix 11
11
A
239 247Right-handed alpha
Helix 12
12
A
247 258Right-handed alpha
Helix 13
13
A
275 280Right-handed 310
Helix 14
14
A
282 286Right-handed 310
Helix 15
15
A
301 306Right-handed alpha
Helix 16
16
A
308 324Right-handed alpha
Helix 17
17
A
377 381Right-handed 310
Helix 18
18
A
382 401Right-handed alpha
Helix 19
19
A
420 427Right-handed alpha
Helix 20
20
A
441 445Right-handed 310
Helix 21
21
B
69 75Right-handed alpha
Helix 22
22
B
89 98Right-handed alpha
Helix 23
23
B
98 111Right-handed alpha
Helix 24
24
B
115 125Right-handed alpha
Helix 25
25
B
137 139Right-handed 310
Helix 26
26
B
151 166Right-handed alpha
Helix 27
27
B
184 188Right-handed 310
Helix 28
28
B
197 215Right-handed alpha
Helix 29
29
B
217 222Right-handed alpha
Helix 30
30
B
234 238Right-handed 310
Helix 31
31
B
239 247Right-handed alpha
Helix 32
32
B
247 258Right-handed alpha
Helix 33
33
B
301 306Right-handed alpha
Helix 34
34
B
308 322Right-handed alpha
Helix 35
35
B
377 381Right-handed 310
Helix 36
36
B
382 401Right-handed alpha
Helix 37
37
B
420 427Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 1H4P. Click on sheet of interest to get list of strands forming it: AA, BA, BB,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 57first strand
Strand 2
A
405 408parallel
Strand 3
A
329 335parallel
Strand 4
A
290 296parallel
Strand 5
A
265 268parallel
Strand 6
A
224 228parallel
Strand 7
A
169 176parallel
Strand 8
A
129 135parallel
Strand 9
A
53 57parallel
Back to list of sheets
Back to top of page

There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 57first strand
Strand 2
B
405 408parallel
Strand 3
B
329 335parallel
Strand 4
B
290 296parallel
Strand 5
B
265 268parallel
Strand 6
B
224 228parallel
Strand 7
B
169 176parallel
Strand 8
B
129 135parallel
Strand 9
B
53 57parallel
Back to list of sheets
Back to top of page

There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
360 361first strand
Strand 2
B
364 365anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il