Analysis of interatomic Contacts of Structural Units in PDB entry:
1H5X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H5X entry

There are 2 chains in PDB entry 1H5X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 21GLY 266
B
 SER 21GLY 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 1H5X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 34Right-handed alpha
Helix 2
2
A
56 60Right-handed alpha
Helix 3
3
A
66 79Right-handed alpha
Helix 4
4
A
101 102Right-handed 310
Helix 5
5
A
108 113Right-handed alpha
Helix 6
6
A
117 127Right-handed alpha
Helix 7
7
A
129 138Right-handed alpha
Helix 8
8
A
153 156Right-handed 310
Helix 9
9
A
163 174Right-handed alpha
Helix 10
10
A
182 191Right-handed alpha
Helix 11
11
A
244 260Right-handed alpha
Helix 12
12
B
29 34Right-handed alpha
Helix 13
13
B
56 60Right-handed alpha
Helix 14
14
B
66 79Right-handed alpha
Helix 15
15
B
108 113Right-handed alpha
Helix 16
16
B
117 127Right-handed alpha
Helix 17
17
B
129 138Right-handed alpha
Helix 18
18
B
153 156Right-handed 310
Helix 19
19
B
163 174Right-handed alpha
Helix 20
20
B
182 191Right-handed alpha
Helix 21
21
B
244 260Right-handed alpha
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There are 4 sheets in PDB entry 1H5X. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
51 53parallel
Strand 3
A
39 45anti-parallel
Strand 4
A
231 241anti-parallel
Strand 5
A
216 228anti-parallel
Strand 6
A
200 208anti-parallel
Strand 7
A
193 196anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 63first strand
Strand 2
A
161 162anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 24first strand
Strand 2
B
51 53parallel
Strand 3
B
39 45anti-parallel
Strand 4
B
231 241anti-parallel
Strand 5
B
216 228anti-parallel
Strand 6
B
200 208anti-parallel
Strand 7
B
193 197anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 63first strand
Strand 2
B
161 162anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il