Analysis of interatomic Contacts of Structural Units in PDB entry:
1H65


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H65 entry

There are 3 chains in PDB entry 1H65 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 8ASP 264
B
 THR 7ALA 262
C
 VAL 8ALA 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 1H65. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 17Right-handed 310
Helix 2
2
A
18 35Right-handed alpha
Helix 3
3
A
51 61Right-handed alpha
Helix 4
4
A
104 115Right-handed alpha
Helix 5
5
A
135 150Right-handed alpha
Helix 6
6
A
151 155Right-handed 310
Helix 7
7
A
168 172Right-handed 310
Helix 8
8
A
173 193Right-handed alpha
Helix 9
9
A
199 203Right-handed 310
Helix 10
10
A
230 244Right-handed alpha
Helix 11
11
A
253 263Right-handed alpha
Helix 12
12
B
12 17Right-handed 310
Helix 13
13
B
18 35Right-handed alpha
Helix 14
14
B
51 61Right-handed alpha
Helix 15
15
B
104 115Right-handed alpha
Helix 16
16
B
135 150Right-handed alpha
Helix 17
17
B
151 155Right-handed 310
Helix 18
18
B
168 172Right-handed 310
Helix 19
19
B
173 193Right-handed alpha
Helix 20
20
B
199 203Right-handed 310
Helix 21
21
B
230 244Right-handed alpha
Helix 22
22
B
253 262Right-handed alpha
Helix 23
23
C
12 16Right-handed 310
Helix 24
24
C
18 34Right-handed alpha
Helix 25
25
C
51 61Right-handed alpha
Helix 26
26
C
104 116Right-handed alpha
Helix 27
27
C
135 150Right-handed alpha
Helix 28
28
C
151 155Right-handed 310
Helix 29
29
C
173 193Right-handed alpha
Helix 30
30
C
199 203Right-handed 310
Helix 31
31
C
230 244Right-handed alpha
Helix 32
32
C
253 263Right-handed alpha
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There are 9 sheets in PDB entry 1H65. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 10first strand
Strand 2
A
78 84parallel
Strand 3
A
87 93anti-parallel
Strand 4
A
39 46parallel
Strand 5
A
122 128parallel
Strand 6
A
157 162parallel
Strand 7
A
206 208parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 99first strand
Strand 2
A
102 103anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 120first strand
Strand 2
A
250 251anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 10first strand
Strand 2
B
78 84parallel
Strand 3
B
87 93anti-parallel
Strand 4
B
39 46parallel
Strand 5
B
122 128parallel
Strand 6
B
157 162parallel
Strand 7
B
206 208parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 99first strand
Strand 2
B
102 103anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 120first strand
Strand 2
B
250 252anti-parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 10first strand
Strand 2
C
78 84parallel
Strand 3
C
87 93anti-parallel
Strand 4
C
39 46parallel
Strand 5
C
122 128parallel
Strand 6
C
157 162parallel
Strand 7
C
206 208parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
98 99first strand
Strand 2
C
102 103anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
118 120first strand
Strand 2
C
250 252anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il