Analysis of interatomic Contacts of Structural Units in PDB entry:
1H6D

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1H6D entry

There are 12 chains in PDB entry 1H6D (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 51	TYR 433
B	ALA 53	TYR 433
C	ALA 52	TYR 433
D	ALA 52	TYR 433
E	ALA 52	TYR 433
F	ALA 53	TYR 433
G	ALA 53	TYR 433
H	ALA 53	TYR 433
I	ALA 52	TYR 433
J	ALA 53	TYR 433
K	ALA 52	TYR 433
L	ALA 53	TYR 433

There are217 helices in PDB entry 1H6D. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	56	61	Right-handed alpha
Helix 2	2	A	92	98	Right-handed alpha
Helix 3	3	A	98	103	Right-handed alpha
Helix 4	4	A	118	129	Right-handed alpha
Helix 5	5	A	132	134	Right-handed 310
Helix 6	6	A	141	148	Right-handed 310
Helix 7	7	A	159	161	Right-handed 310
Helix 8	8	A	162	173	Right-handed alpha
Helix 9	9	A	186	201	Right-handed alpha
Helix 10	10	A	208	212	Right-handed 310
Helix 11	11	A	213	225	Right-handed alpha
Helix 12	12	A	246	251	Right-handed alpha
Helix 13	13	A	254	259	Right-handed alpha
Helix 14	14	A	261	266	Right-handed alpha
Helix 15	15	A	266	279	Right-handed alpha
Helix 16	16	A	295	299	Right-handed 310
Helix 17	17	A	375	390	Right-handed alpha
Helix 18	18	A	397	418	Right-handed alpha
Helix 19	19	B	56	61	Right-handed alpha
Helix 20	20	B	92	98	Right-handed alpha
Helix 21	21	B	98	104	Right-handed alpha
Helix 22	22	B	118	129	Right-handed alpha
Helix 23	23	B	132	134	Right-handed 310
Helix 24	24	B	141	148	Right-handed 310
Helix 25	25	B	159	161	Right-handed 310
Helix 26	26	B	162	173	Right-handed alpha
Helix 27	27	B	186	201	Right-handed alpha
Helix 28	28	B	208	212	Right-handed 310
Helix 29	29	B	213	225	Right-handed alpha
Helix 30	30	B	246	251	Right-handed alpha
Helix 31	31	B	254	259	Right-handed alpha
Helix 32	32	B	261	266	Right-handed alpha
Helix 33	33	B	266	279	Right-handed alpha
Helix 34	34	B	295	299	Right-handed 310
Helix 35	35	B	375	390	Right-handed alpha
Helix 36	36	B	397	418	Right-handed alpha
Helix 37	37	C	56	61	Right-handed alpha
Helix 38	38	C	92	98	Right-handed alpha
Helix 39	39	C	98	103	Right-handed alpha
Helix 40	40	C	118	129	Right-handed alpha
Helix 41	41	C	132	134	Right-handed 310
Helix 42	42	C	141	148	Right-handed 310
Helix 43	43	C	159	161	Right-handed 310
Helix 44	44	C	162	173	Right-handed alpha
Helix 45	45	C	186	201	Right-handed alpha
Helix 46	46	C	208	212	Right-handed 310
Helix 47	47	C	213	225	Right-handed alpha
Helix 48	48	C	246	251	Right-handed alpha
Helix 49	49	C	254	259	Right-handed alpha
Helix 50	50	C	261	266	Right-handed alpha
Helix 51	51	C	266	279	Right-handed alpha
Helix 52	52	C	295	299	Right-handed 310
Helix 53	53	C	375	390	Right-handed alpha
Helix 54	54	C	397	418	Right-handed alpha
Helix 55	55	D	56	62	Right-handed alpha
Helix 56	56	D	92	98	Right-handed alpha
Helix 57	57	D	98	103	Right-handed alpha
Helix 58	58	D	118	129	Right-handed alpha
Helix 59	59	D	132	134	Right-handed 310
Helix 60	60	D	141	148	Right-handed 310
Helix 61	61	D	159	161	Right-handed 310
Helix 62	62	D	162	173	Right-handed alpha
Helix 63	63	D	186	201	Right-handed alpha
Helix 64	64	D	208	212	Right-handed 310
Helix 65	65	D	213	225	Right-handed alpha
Helix 66	66	D	246	251	Right-handed alpha
Helix 67	67	D	254	259	Right-handed alpha
Helix 68	68	D	261	266	Right-handed alpha
Helix 69	69	D	266	279	Right-handed alpha
Helix 70	70	D	295	299	Right-handed 310
Helix 71	71	D	375	390	Right-handed alpha
Helix 72	72	D	397	418	Right-handed alpha
Helix 73	73	E	56	61	Right-handed alpha
Helix 74	74	E	92	98	Right-handed alpha
Helix 75	75	E	98	103	Right-handed alpha
Helix 76	76	E	118	129	Right-handed alpha
Helix 77	77	E	132	134	Right-handed 310
Helix 78	78	E	140	148	Right-handed 310
Helix 79	79	E	159	161	Right-handed 310
Helix 80	80	E	162	173	Right-handed alpha
Helix 81	81	E	186	201	Right-handed alpha
Helix 82	82	E	208	212	Right-handed 310
Helix 83	83	E	213	225	Right-handed alpha
Helix 84	84	E	246	251	Right-handed alpha
Helix 85	85	E	254	259	Right-handed alpha
Helix 86	86	E	261	266	Right-handed alpha
Helix 87	87	E	266	279	Right-handed alpha
Helix 88	88	E	295	299	Right-handed 310
Helix 89	89	E	375	391	Right-handed alpha
Helix 90	90	E	397	418	Right-handed alpha
Helix 91	91	F	56	61	Right-handed alpha
Helix 92	92	F	92	98	Right-handed alpha
Helix 93	93	F	98	103	Right-handed alpha
Helix 94	94	F	104	106	Right-handed 310
Helix 95	95	F	118	129	Right-handed alpha
Helix 96	96	F	141	148	Right-handed 310
Helix 97	97	F	159	162	Right-handed 310
Helix 98	98	F	163	173	Right-handed alpha
Helix 99	99	F	186	201	Right-handed alpha
Helix 100	100	F	208	212	Right-handed 310
Helix 101	101	F	213	225	Right-handed alpha
Helix 102	102	F	246	251	Right-handed alpha
Helix 103	103	F	254	259	Right-handed alpha
Helix 104	104	F	261	266	Right-handed alpha
Helix 105	105	F	266	279	Right-handed alpha
Helix 106	106	F	295	299	Right-handed 310
Helix 107	107	F	375	390	Right-handed alpha
Helix 108	108	F	397	418	Right-handed alpha
Helix 109	109	G	56	61	Right-handed alpha
Helix 110	110	G	92	98	Right-handed alpha
Helix 111	111	G	98	104	Right-handed alpha
Helix 112	112	G	118	129	Right-handed alpha
Helix 113	113	G	132	134	Right-handed 310
Helix 114	114	G	141	148	Right-handed 310
Helix 115	115	G	159	161	Right-handed 310
Helix 116	116	G	162	173	Right-handed alpha
Helix 117	117	G	186	201	Right-handed alpha
Helix 118	118	G	208	212	Right-handed 310
Helix 119	119	G	213	225	Right-handed alpha
Helix 120	120	G	246	251	Right-handed alpha
Helix 121	121	G	254	259	Right-handed alpha
Helix 122	122	G	261	266	Right-handed alpha
Helix 123	123	G	266	279	Right-handed alpha
Helix 124	124	G	295	299	Right-handed 310
Helix 125	125	G	375	391	Right-handed alpha
Helix 126	126	G	397	418	Right-handed alpha
Helix 127	127	H	56	61	Right-handed alpha
Helix 128	128	H	92	98	Right-handed alpha
Helix 129	129	H	98	103	Right-handed alpha
Helix 130	130	H	118	129	Right-handed alpha
Helix 131	131	H	132	134	Right-handed 310
Helix 132	132	H	141	148	Right-handed 310
Helix 133	133	H	159	161	Right-handed 310
Helix 134	134	H	162	173	Right-handed alpha
Helix 135	135	H	186	200	Right-handed alpha
Helix 136	136	H	208	212	Right-handed 310
Helix 137	137	H	213	225	Right-handed alpha
Helix 138	138	H	246	251	Right-handed alpha
Helix 139	139	H	254	259	Right-handed alpha
Helix 140	140	H	261	266	Right-handed alpha
Helix 141	141	H	266	279	Right-handed alpha
Helix 142	142	H	295	299	Right-handed 310
Helix 143	143	H	375	390	Right-handed alpha
Helix 144	144	H	397	418	Right-handed alpha
Helix 145	145	I	56	61	Right-handed alpha
Helix 146	146	I	92	98	Right-handed alpha
Helix 147	147	I	98	104	Right-handed alpha
Helix 148	148	I	118	129	Right-handed alpha
Helix 149	149	I	132	134	Right-handed 310
Helix 150	150	I	141	148	Right-handed 310
Helix 151	151	I	159	161	Right-handed 310
Helix 152	152	I	162	173	Right-handed alpha
Helix 153	153	I	186	201	Right-handed alpha
Helix 154	154	I	208	212	Right-handed 310
Helix 155	155	I	213	225	Right-handed alpha
Helix 156	156	I	246	251	Right-handed alpha
Helix 157	157	I	254	259	Right-handed alpha
Helix 158	158	I	261	266	Right-handed alpha
Helix 159	159	I	266	279	Right-handed alpha
Helix 160	160	I	295	299	Right-handed 310
Helix 161	161	I	375	390	Right-handed alpha
Helix 162	162	I	397	418	Right-handed alpha
Helix 163	163	J	56	61	Right-handed alpha
Helix 164	164	J	92	98	Right-handed alpha
Helix 165	165	J	98	103	Right-handed alpha
Helix 166	166	J	104	106	Right-handed 310
Helix 167	167	J	118	129	Right-handed alpha
Helix 168	168	J	132	134	Right-handed 310
Helix 169	169	J	141	148	Right-handed 310
Helix 170	170	J	159	161	Right-handed 310
Helix 171	171	J	162	173	Right-handed alpha
Helix 172	172	J	186	200	Right-handed alpha
Helix 173	173	J	208	212	Right-handed 310
Helix 174	174	J	213	225	Right-handed alpha
Helix 175	175	J	246	251	Right-handed alpha
Helix 176	176	J	254	259	Right-handed alpha
Helix 177	177	J	261	266	Right-handed alpha
Helix 178	178	J	266	279	Right-handed alpha
Helix 179	179	J	295	299	Right-handed 310
Helix 180	180	J	375	390	Right-handed alpha
Helix 181	181	J	397	418	Right-handed alpha
Helix 182	182	K	56	61	Right-handed alpha
Helix 183	183	K	92	98	Right-handed alpha
Helix 184	184	K	98	104	Right-handed alpha
Helix 185	185	K	118	129	Right-handed alpha
Helix 186	186	K	132	134	Right-handed 310
Helix 187	187	K	141	148	Right-handed 310
Helix 188	188	K	159	161	Right-handed 310
Helix 189	189	K	162	173	Right-handed alpha
Helix 190	190	K	186	201	Right-handed alpha
Helix 191	191	K	208	212	Right-handed 310
Helix 192	192	K	213	225	Right-handed alpha
Helix 193	193	K	246	251	Right-handed alpha
Helix 194	194	K	254	259	Right-handed alpha
Helix 195	195	K	261	266	Right-handed alpha
Helix 196	196	K	266	279	Right-handed alpha
Helix 197	197	K	295	299	Right-handed 310
Helix 198	198	K	375	390	Right-handed alpha
Helix 199	199	K	397	418	Right-handed alpha
Helix 200	200	L	56	61	Right-handed alpha
Helix 201	201	L	92	98	Right-handed alpha
Helix 202	202	L	98	103	Right-handed alpha
Helix 203	203	L	118	129	Right-handed alpha
Helix 204	204	L	132	134	Right-handed 310
Helix 205	205	L	140	148	Right-handed 310
Helix 206	206	L	159	161	Right-handed 310
Helix 207	207	L	162	173	Right-handed alpha
Helix 208	208	L	186	201	Right-handed alpha
Helix 209	209	L	208	212	Right-handed 310
Helix 210	210	L	213	225	Right-handed alpha
Helix 211	211	L	246	251	Right-handed alpha
Helix 212	212	L	254	259	Right-handed alpha
Helix 213	213	L	261	266	Right-handed alpha
Helix 214	214	L	266	279	Right-handed alpha
Helix 215	215	L	295	299	Right-handed 310
Helix 216	216	L	375	390	Right-handed alpha
Helix 217	217	L	397	418	Right-handed alpha

There are 18 sheets in PDB entry 1H6D. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, A, EA, EB, FA, FB, GA, HA, IA, IB, JA, JB, KA, LA,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	137	first strand
Strand 2	A	109	115	parallel
Strand 3	A	84	89	parallel
Strand 4	A	153	156	parallel
Strand 5	A	176	179	parallel
Strand 6	A	204	206	parallel

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There are 18 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	421	422	first strand
Strand 2	A	282	290	anti-parallel
Strand 3	A	304	311	anti-parallel
Strand 4	A	316	322	anti-parallel
Strand 5	A	231	239	parallel
Strand 6	A	328	335	anti-parallel
Strand 7	A	339	342	anti-parallel
Strand 8	A	353	357	anti-parallel
Strand 9	A	360	364	anti-parallel
Strand 10	D	360	364	anti-parallel
Strand 11	D	353	357	anti-parallel
Strand 12	D	339	342	anti-parallel
Strand 13	D	328	335	anti-parallel
Strand 14	D	231	239	anti-parallel
Strand 15	D	316	322	parallel
Strand 16	D	304	311	anti-parallel
Strand 17	D	282	290	anti-parallel
Strand 18	D	421	422	anti-parallel

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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	136	137	first strand
Strand 2	B	109	115	parallel
Strand 3	B	84	89	parallel
Strand 4	B	153	156	parallel
Strand 5	B	176	179	parallel
Strand 6	B	204	206	parallel

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There are 18 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	421	422	first strand
Strand 2	B	282	290	anti-parallel
Strand 3	B	304	311	anti-parallel
Strand 4	B	316	322	anti-parallel
Strand 5	B	231	239	parallel
Strand 6	B	328	335	anti-parallel
Strand 7	B	339	342	anti-parallel
Strand 8	B	353	357	anti-parallel
Strand 9	B	360	364	anti-parallel
Strand 10	C	360	364	anti-parallel
Strand 11	C	353	357	anti-parallel
Strand 12	C	339	342	anti-parallel
Strand 13	C	328	335	anti-parallel
Strand 14	C	231	239	anti-parallel
Strand 15	C	316	322	parallel
Strand 16	C	304	311	anti-parallel
Strand 17	C	282	290	anti-parallel
Strand 18	C	421	422	anti-parallel

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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	137	first strand
Strand 2	C	109	115	parallel
Strand 3	C	84	89	parallel
Strand 4	C	153	156	parallel
Strand 5	C	176	179	parallel
Strand 6	C	204	206	parallel

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There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	136	137	first strand
Strand 2	D	109	115	parallel
Strand 3	D	84	89	parallel
Strand 4	D	153	156	parallel
Strand 5	D	176	179	parallel
Strand 6	D	204	206	parallel

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There are 6 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	136	137	first strand
Strand 2	E	109	115	parallel
Strand 3	E	84	89	parallel
Strand 4	E	153	156	parallel
Strand 5	E	176	179	parallel
Strand 6	E	204	206	parallel

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There are 18 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	421	422	first strand
Strand 2	E	282	290	anti-parallel
Strand 3	E	304	311	anti-parallel
Strand 4	E	316	322	anti-parallel
Strand 5	E	231	239	parallel
Strand 6	E	328	335	anti-parallel
Strand 7	E	339	342	anti-parallel
Strand 8	E	353	357	anti-parallel
Strand 9	E	360	364	anti-parallel
Strand 10	H	360	364	anti-parallel
Strand 11	H	353	357	anti-parallel
Strand 12	H	339	342	anti-parallel
Strand 13	H	328	335	anti-parallel
Strand 14	H	231	239	anti-parallel
Strand 15	H	316	322	parallel
Strand 16	H	304	311	anti-parallel
Strand 17	H	282	290	anti-parallel
Strand 18	H	421	422	anti-parallel

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There are 6 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	136	137	first strand
Strand 2	F	109	115	parallel
Strand 3	F	84	89	parallel
Strand 4	F	153	156	parallel
Strand 5	F	176	179	parallel
Strand 6	F	204	206	parallel

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There are 18 strands in FB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	421	422	first strand
Strand 2	F	282	290	anti-parallel
Strand 3	F	304	311	anti-parallel
Strand 4	F	316	322	anti-parallel
Strand 5	F	233	239	parallel
Strand 6	F	328	334	anti-parallel
Strand 7	F	339	342	anti-parallel
Strand 8	F	352	357	anti-parallel
Strand 9	F	360	365	anti-parallel
Strand 10	G	360	364	anti-parallel
Strand 11	G	353	357	anti-parallel
Strand 12	G	339	342	anti-parallel
Strand 13	G	328	335	anti-parallel
Strand 14	G	231	239	anti-parallel
Strand 15	G	316	322	parallel
Strand 16	G	304	311	anti-parallel
Strand 17	G	282	290	anti-parallel
Strand 18	G	421	422	anti-parallel

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There are 6 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	136	137	first strand
Strand 2	G	109	115	parallel
Strand 3	G	84	89	parallel
Strand 4	G	153	156	parallel
Strand 5	G	176	179	parallel
Strand 6	G	204	206	parallel

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There are 6 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	136	137	first strand
Strand 2	H	109	115	parallel
Strand 3	H	84	89	parallel
Strand 4	H	153	156	parallel
Strand 5	H	176	179	parallel
Strand 6	H	204	206	parallel

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There are 6 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	136	137	first strand
Strand 2	I	109	115	parallel
Strand 3	I	84	89	parallel
Strand 4	I	153	156	parallel
Strand 5	I	176	179	parallel
Strand 6	I	204	206	parallel

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There are 18 strands in IB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	421	422	first strand
Strand 2	I	282	290	anti-parallel
Strand 3	I	304	311	anti-parallel
Strand 4	I	316	322	anti-parallel
Strand 5	I	231	239	parallel
Strand 6	I	328	335	anti-parallel
Strand 7	I	339	342	anti-parallel
Strand 8	I	353	357	anti-parallel
Strand 9	I	360	364	anti-parallel
Strand 10	L	360	364	anti-parallel
Strand 11	L	353	357	anti-parallel
Strand 12	L	339	342	anti-parallel
Strand 13	L	328	335	anti-parallel
Strand 14	L	231	239	anti-parallel
Strand 15	L	316	322	parallel
Strand 16	L	304	311	anti-parallel
Strand 17	L	282	290	anti-parallel
Strand 18	L	421	422	anti-parallel

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There are 6 strands in JA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	136	137	first strand
Strand 2	J	109	115	parallel
Strand 3	J	84	89	parallel
Strand 4	J	153	156	parallel
Strand 5	J	176	179	parallel
Strand 6	J	204	206	parallel

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There are 18 strands in JB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	421	422	first strand
Strand 2	J	282	290	anti-parallel
Strand 3	J	304	311	anti-parallel
Strand 4	J	316	322	anti-parallel
Strand 5	J	231	239	parallel
Strand 6	J	328	335	anti-parallel
Strand 7	J	339	342	anti-parallel
Strand 8	J	353	357	anti-parallel
Strand 9	J	360	364	anti-parallel
Strand 10	K	360	364	anti-parallel
Strand 11	K	353	357	anti-parallel
Strand 12	K	339	342	anti-parallel
Strand 13	K	328	335	anti-parallel
Strand 14	K	231	239	anti-parallel
Strand 15	K	316	322	parallel
Strand 16	K	304	311	anti-parallel
Strand 17	K	282	290	anti-parallel
Strand 18	K	421	422	anti-parallel

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There are 6 strands in KA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	136	137	first strand
Strand 2	K	109	115	parallel
Strand 3	K	84	89	parallel
Strand 4	K	153	156	parallel
Strand 5	K	176	179	parallel
Strand 6	K	204	206	parallel

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There are 6 strands in LA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	136	137	first strand
Strand 2	L	109	115	parallel
Strand 3	L	84	89	parallel
Strand 4	L	153	156	parallel
Strand 5	L	176	179	parallel
Strand 6	L	204	206	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1H6D

Analysis of interatomic Contacts of Structural Units in PDB entry:
1H6D