Analysis of interatomic Contacts of Structural Units in PDB entry:
1H6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H6L entry

There is 1 chain in PDB entry 1H6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 29SER 381
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 1H6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
65 68Right-handed 310
Helix 2
2
A
268 270Right-handed 310
Helix 3
3
A
280 282Right-handed 310
Helix 4
4
A
355 360Right-handed alpha
Helix 5
5
A
361 363Right-handed 310
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There are 8 sheets in PDB entry 1H6L. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 38first strand
Strand 2
A
295 301parallel
Strand 3
A
283 288anti-parallel
Strand 4
A
272 278anti-parallel
Strand 5
A
259 266anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 43first strand
Strand 2
A
349 354anti-parallel
Strand 3
A
331 336anti-parallel
Strand 4
A
316 319anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 60first strand
Strand 2
A
70 75anti-parallel
Strand 3
A
81 84anti-parallel
Strand 4
A
89 92anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 109first strand
Strand 2
A
112 121anti-parallel
Strand 3
A
128 135anti-parallel
Strand 4
A
151 152anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 109first strand
Strand 2
A
112 121anti-parallel
Strand 3
A
128 135anti-parallel
Strand 4
A
140 143anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 165first strand
Strand 2
A
172 177anti-parallel
Strand 3
A
182 190anti-parallel
Strand 4
A
196 205anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 216first strand
Strand 2
A
221 226anti-parallel
Strand 3
A
230 235anti-parallel
Strand 4
A
245 249anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
340 341first strand
Strand 2
A
344 345anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il