Analysis of interatomic Contacts of Structural Units in PDB entry:
1H6S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H6S entry

There is 1 chain in PDB entry 1H6S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
GLU 1PHE 289
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 1H6S. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
1
59 63Right-handed 310
Helix 2
2
1
88 92Right-handed alpha
Helix 3
3
1
156 160Right-handed 310
Helix 4
4
1
184 188Right-handed 310
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There is 1 sheet ( 1A) in PDB entry 1H6S.

There are 17 strands in 1A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
1
2 15first strand
Strand 2
1
25 40anti-parallel
Strand 3
1
46 56anti-parallel
Strand 4
1
70 75anti-parallel
Strand 5
1
78 83anti-parallel
Strand 6
1
131 139anti-parallel
Strand 7
1
142 150anti-parallel
Strand 8
1
163 171anti-parallel
Strand 9
1
175 183anti-parallel
Strand 10
1
193 200anti-parallel
Strand 11
1
206 214anti-parallel
Strand 12
1
222 232anti-parallel
Strand 13
1
235 244anti-parallel
Strand 14
1
252 262anti-parallel
Strand 15
1
265 273anti-parallel
Strand 16
1
279 288anti-parallel
Strand 17
1
2 15anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il