Analysis of interatomic Contacts of Structural Units in PDB entry:
1H7F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H7F entry

There are 2 chains in PDB entry 1H7F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1ALA 245
B
 SER 1LEU 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1H7F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 21Right-handed 310
Helix 2
2
A
29 38Right-handed alpha
Helix 3
3
A
52 62Right-handed alpha
Helix 4
4
A
75 87Right-handed alpha
Helix 5
5
A
103 117Right-handed alpha
Helix 6
6
A
130 135Right-handed alpha
Helix 7
7
A
163 167Right-handed 310
Helix 8
8
A
180 186Right-handed alpha
Helix 9
9
A
187 189Right-handed 310
Helix 10
10
A
192 199Right-handed alpha
Helix 11
11
A
202 208Right-handed alpha
Helix 12
12
A
226 244Right-handed alpha
Helix 13
13
B
18 21Right-handed 310
Helix 14
14
B
29 38Right-handed alpha
Helix 15
15
B
52 62Right-handed alpha
Helix 16
16
B
75 87Right-handed alpha
Helix 17
17
B
103 117Right-handed alpha
Helix 18
18
B
130 135Right-handed alpha
Helix 19
19
B
163 167Right-handed 310
Helix 20
20
B
180 186Right-handed alpha
Helix 21
21
B
187 189Right-handed 310
Helix 22
22
B
192 199Right-handed alpha
Helix 23
23
B
202 208Right-handed alpha
Helix 24
24
B
226 240Right-handed alpha
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There are 6 sheets in PDB entry 1H7F. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 68first strand
Strand 2
A
45 50parallel
Strand 3
A
3 8parallel
Strand 4
A
91 94parallel
Strand 5
A
169 179anti-parallel
Strand 6
A
122 129anti-parallel
Strand 7
A
212 216parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 24first strand
Strand 2
A
27 28anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 144first strand
Strand 2
A
150 154anti-parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 68first strand
Strand 2
B
45 50parallel
Strand 3
B
3 8parallel
Strand 4
B
91 94parallel
Strand 5
B
169 179anti-parallel
Strand 6
B
122 129anti-parallel
Strand 7
B
212 216parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 24first strand
Strand 2
B
27 28anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 144first strand
Strand 2
B
150 154anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il