Analysis of interatomic Contacts of Structural Units in PDB entry:
1H7Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H7Q entry

There is 1 chain in PDB entry 1H7Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2GLY 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1H7Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 26Right-handed alpha
Helix 2
2
A
42 50Right-handed alpha
Helix 3
3
A
51 55Right-handed 310
Helix 4
4
A
67 74Right-handed alpha
Helix 5
5
A
75 88Right-handed alpha
Helix 6
6
A
105 117Right-handed alpha
Helix 7
7
A
158 160Right-handed 310
Helix 8
8
A
166 177Right-handed alpha
Helix 9
9
A
183 187Right-handed 310
Helix 10
10
A
189 199Right-handed alpha
Helix 11
11
A
233 237Right-handed 310
Helix 12
12
A
242 254Right-handed alpha
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There are 2 sheets in PDB entry 1H7Q. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 62first strand
Strand 2
A
32 38parallel
Strand 3
A
4 10parallel
Strand 4
A
92 97parallel
Strand 5
A
162 165anti-parallel
Strand 6
A
122 132anti-parallel
Strand 7
A
205 217parallel
Strand 8
A
100 102anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 62first strand
Strand 2
A
32 38parallel
Strand 3
A
4 10parallel
Strand 4
A
92 97parallel
Strand 5
A
162 165anti-parallel
Strand 6
A
122 132anti-parallel
Strand 7
A
138 144anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il