Analysis of interatomic Contacts of Structural Units in PDB entry:
1H88


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H88 entry

There are 5 chains in PDB entry 1H88 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 267GLU 336
B
 THR 266GLU 336
C
 GLY 39ARG 190
D
 G 1 G 26
E
 C 1 T 26
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1H88. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
271 333Right-handed alpha
Helix 2
2
B
271 333Right-handed alpha
Helix 3
3
C
44 59Right-handed alpha
Helix 4
4
C
62 70Right-handed alpha
Helix 5
5
C
74 84Right-handed alpha
Helix 6
6
C
96 111Right-handed alpha
Helix 7
7
C
114 120Right-handed alpha
Helix 8
8
C
126 137Right-handed alpha
Helix 9
9
C
148 163Right-handed alpha
Helix 10
10
C
165 170Right-handed alpha
Helix 11
11
C
171 173Right-handed 310
Helix 12
12
C
177 188Right-handed alpha
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There are no sheets in PDB entry 1H88
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