Analysis of interatomic Contacts of Structural Units in PDB entry:
1H8L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H8L entry

There is 1 chain in PDB entry 1H8L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4THR 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1H8L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 30Right-handed alpha
Helix 2
2
A
78 95Right-handed alpha
Helix 3
3
A
98 108Right-handed alpha
Helix 4
4
A
117 123Right-handed alpha
Helix 5
5
A
142 146Right-handed 310
Helix 6
6
A
159 172Right-handed alpha
Helix 7
7
A
206 219Right-handed alpha
Helix 8
8
A
221 226Right-handed alpha
Helix 9
9
A
239 241Right-handed 310
Helix 10
10
A
246 250Right-handed alpha
Helix 11
11
A
255 264Right-handed alpha
Helix 12
12
A
280 282Right-handed 310
Helix 13
13
A
283 301Right-handed alpha
Helix 14
14
A
302 304Right-handed 310
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There are 4 sheets in PDB entry 1H8L. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 41first strand
Strand 2
A
47 53anti-parallel
Strand 3
A
109 113anti-parallel
Strand 4
A
66 70parallel
Strand 5
A
174 181parallel
Strand 6
A
267 274parallel
Strand 7
A
184 189anti-parallel
Strand 8
A
243 245parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
340 343first strand
Strand 2
A
305 312anti-parallel
Strand 3
A
373 375parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
340 343first strand
Strand 2
A
305 312anti-parallel
Strand 3
A
378 380parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 334first strand
Strand 2
A
323 326anti-parallel
Strand 3
A
348 355anti-parallel
Strand 4
A
362 368anti-parallel
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