Analysis of interatomic Contacts of Structural Units in PDB entry:
1H8N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H8N entry

There is 1 chain in PDB entry 1H8N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3ALA 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 1H8N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
82 86Right-handed 310
Helix 2
2
A
159 163Right-handed 310
Helix 3
3
A
193 196Right-handed 310
Helix 4
4
A
205 207Right-handed 310
Helix 5
5
A
218 222Right-handed 310
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There are 6 sheets in PDB entry 1H8N. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 8first strand
Strand 2
A
22 28anti-parallel
Strand 3
A
73 78anti-parallel
Strand 4
A
65 70anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
105 108parallel
Strand 3
A
88 93anti-parallel
Strand 4
A
36 41anti-parallel
Strand 5
A
48 52anti-parallel
Strand 6
A
56 57anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
105 108parallel
Strand 3
A
88 93anti-parallel
Strand 4
A
100 101anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 138first strand
Strand 2
A
149 156anti-parallel
Strand 3
A
209 214anti-parallel
Strand 4
A
199 204anti-parallel
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There are 6 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
237 241parallel
Strand 3
A
223 229anti-parallel
Strand 4
A
165 170anti-parallel
Strand 5
A
176 183anti-parallel
Strand 6
A
188 191anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
237 241parallel
Strand 3
A
223 229anti-parallel
Strand 4
A
232 233anti-parallel
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