Analysis of interatomic Contacts of Structural Units in PDB entry:
1H8Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H8Q entry

There is 1 chain in PDB entry 1H8Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 14GLU 468
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1H8Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 36Right-handed alpha
Helix 2
2
A
81 87Right-handed alpha
Helix 3
3
A
100 103Right-handed 310
Helix 4
4
A
115 131Right-handed alpha
Helix 5
5
A
148 157Right-handed alpha
Helix 6
6
A
165 176Right-handed alpha
Helix 7
7
A
195 200Right-handed alpha
Helix 8
8
A
213 224Right-handed alpha
Helix 9
9
A
274 279Right-handed alpha
Helix 10
10
A
288 298Right-handed alpha
Helix 11
11
A
355 364Right-handed alpha
Helix 12
12
A
365 381Right-handed alpha
Helix 13
13
A
416 425Right-handed alpha
Helix 14
14
A
444 464Right-handed alpha
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There are 6 sheets in PDB entry 1H8Q. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 240first strand
Strand 2
A
39 43parallel
Strand 3
A
16 19parallel
Strand 4
A
268 271parallel
Strand 5
A
430 432parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
61 63anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 73first strand
Strand 2
A
204 208anti-parallel
Strand 3
A
93 95anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 106first strand
Strand 2
A
323 326parallel
Strand 3
A
335 338anti-parallel
Strand 4
A
348 354anti-parallel
Strand 5
A
303 309anti-parallel
Strand 6
A
391 393anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 266first strand
Strand 2
A
254 258anti-parallel
Strand 3
A
244 248anti-parallel
Strand 4
A
282 283parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 301first strand
Strand 2
A
407 408anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il