Analysis of interatomic Contacts of Structural Units in PDB entry:
1HIY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HIY entry

There are 3 chains in PDB entry 1HIY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 6GLU 155
B
 VAL 206GLU 355
C
 VAL 406GLU 555
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 1HIY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 22Right-handed alpha
Helix 2
2
A
24 36Right-handed alpha
Helix 3
3
A
48 56Right-handed alpha
Helix 4
4
A
57 60Right-handed 310
Helix 5
5
A
63 73Right-handed alpha
Helix 6
6
A
86 96Right-handed alpha
Helix 7
7
A
99 103Right-handed 310
Helix 8
8
A
107 113Right-handed alpha
Helix 9
9
A
126 138Right-handed alpha
Helix 10
10
A
139 143Right-handed 310
Helix 11
11
B
216 221Right-handed alpha
Helix 12
12
B
224 236Right-handed alpha
Helix 13
13
B
248 256Right-handed alpha
Helix 14
14
B
257 260Right-handed 310
Helix 15
15
B
264 274Right-handed alpha
Helix 16
16
B
286 296Right-handed alpha
Helix 17
17
B
307 313Right-handed alpha
Helix 18
18
B
326 338Right-handed alpha
Helix 19
19
C
416 421Right-handed alpha
Helix 20
20
C
424 436Right-handed alpha
Helix 21
21
C
448 456Right-handed alpha
Helix 22
22
C
457 460Right-handed 310
Helix 23
23
C
465 470Right-handed alpha
Helix 24
24
C
486 496Right-handed alpha
Helix 25
25
C
499 503Right-handed 310
Helix 26
26
C
507 513Right-handed alpha
Helix 27
27
C
526 538Right-handed alpha
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There are 3 sheets in PDB entry 1HIY. Click on sheet of interest to get list of strands forming it: AA, BA, CA,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 45first strand
Strand 2
A
77 83anti-parallel
Strand 3
A
10 15anti-parallel
Strand 4
A
121 123anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 245first strand
Strand 2
B
277 283anti-parallel
Strand 3
B
210 215anti-parallel
Strand 4
B
321 323anti-parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
438 445first strand
Strand 2
C
477 483anti-parallel
Strand 3
C
410 415anti-parallel
Strand 4
C
521 522anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il