Analysis of interatomic Contacts of Structural Units in PDB entry:
1HJC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HJC entry

There are 6 chains in PDB entry 1HJC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 60ARG 177
B
 G 11 G 26
C
 C 1 T 16
D
 GLY 60ARG 177
E
 G 11 G 26
F
 C 1 T 16
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 1HJC

There are 6 sheets in PDB entry 1HJC. Click on sheet of interest to get list of strands forming it: AA, AB, AC, A, DB, C,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 64first strand
Strand 2
A
70 73anti-parallel
Strand 3
A
90 93anti-parallel
Strand 4
A
128 130anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 80first strand
Strand 2
A
158 169parallel
Strand 3
A
146 152anti-parallel
Strand 4
A
102 108anti-parallel
Strand 5
A
121 123anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
135 136anti-parallel
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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
62 64first strand
Strand 2
D
70 73anti-parallel
Strand 3
D
90 93anti-parallel
Strand 4
D
128 130anti-parallel
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There are 5 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
78 80first strand
Strand 2
D
158 169parallel
Strand 3
D
146 152anti-parallel
Strand 4
D
102 108anti-parallel
Strand 5
D
121 123anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
117 118first strand
Strand 2
D
135 136anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il