Analysis of interatomic Contacts of Structural Units in PDB entry:
1HJQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HJQ entry

There is 1 chain in PDB entry 1HJQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ILE 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1HJQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 18Right-handed alpha
Helix 2
2
A
31 39Right-handed alpha
Helix 3
3
A
58 72Right-handed alpha
Helix 4
4
A
101 124Right-handed alpha
Helix 5
5
A
149 166Right-handed alpha
Helix 6
6
A
184 199Right-handed alpha
Helix 7
7
A
202 206Right-handed 310
Helix 8
8
A
222 238Right-handed alpha
Helix 9
9
A
260 264Right-handed 310
Helix 10
10
A
269 287Right-handed alpha
Helix 11
11
A
300 304Right-handed 310
Helix 12
12
A
323 326Right-handed 310
Helix 13
13
A
327 332Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 1HJQ.

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
290 296parallel
Strand 3
A
240 245parallel
Strand 4
A
208 212parallel
Strand 5
A
174 179parallel
Strand 6
A
129 132parallel
Strand 7
A
75 80parallel
Strand 8
A
43 48parallel
Strand 9
A
4 8parallel
Strand 10
A
4 8first strand
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