Analysis of interatomic Contacts of Structural Units in PDB entry:
1HJR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HJR entry

There are 4 chains in PDB entry 1HJR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1GLN 158
B
 ALA 1GLN 158
C
 ALA 1GLN 158
D
 ALA 1GLN 158
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 1HJR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
H1A
A
39 59Right-handed alpha
Helix 2
H2A
A
76 93Right-handed alpha
Helix 3
H3A
A
103 111Right-handed alpha
Helix 4
H4A
A
117 129Right-handed alpha
Helix 5
H5A
A
139 152Right-handed alpha
Helix 6
H1B
B
39 59Right-handed alpha
Helix 7
H2B
B
76 93Right-handed alpha
Helix 8
H3B
B
103 111Right-handed alpha
Helix 9
H4B
B
117 129Right-handed alpha
Helix 10
H5B
B
139 152Right-handed alpha
Helix 11
H1C
C
39 59Right-handed alpha
Helix 12
H2C
C
76 93Right-handed alpha
Helix 13
H3C
C
103 111Right-handed alpha
Helix 14
H4C
C
117 129Right-handed alpha
Helix 15
H5C
C
139 152Right-handed alpha
Helix 16
H1D
D
39 59Right-handed alpha
Helix 17
H2D
D
76 93Right-handed alpha
Helix 18
H3D
D
103 111Right-handed alpha
Helix 19
H4D
D
117 129Right-handed alpha
Helix 20
H5D
D
139 152Right-handed alpha
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There are 4 sheets in PDB entry 1HJR. Click on sheet of interest to get list of strands forming it: SA, SB, SC, SD,

There are 5 strands in SA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 35first strand
Strand 2
A
11 21anti-parallel
Strand 3
A
1 9anti-parallel
Strand 4
A
62 67parallel
Strand 5
A
97 101parallel
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There are 5 strands in SB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 35first strand
Strand 2
B
11 21anti-parallel
Strand 3
B
1 9anti-parallel
Strand 4
B
62 67parallel
Strand 5
B
97 101parallel
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There are 5 strands in SC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
24 35first strand
Strand 2
C
11 21anti-parallel
Strand 3
C
1 9anti-parallel
Strand 4
C
62 67parallel
Strand 5
C
97 101parallel
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There are 5 strands in SD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
24 35first strand
Strand 2
D
11 21anti-parallel
Strand 3
D
1 9anti-parallel
Strand 4
D
62 67parallel
Strand 5
D
97 101parallel
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