Analysis of interatomic Contacts of Structural Units in PDB entry:
1HJS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HJS entry

There are 4 chains in PDB entry 1HJS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ILE 332
B
 ALA 1ILE 332
C
 ALA 1ILE 332
D
 ALA 1ILE 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 1HJS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 18Right-handed alpha
Helix 2
2
A
31 39Right-handed alpha
Helix 3
3
A
58 72Right-handed alpha
Helix 4
4
A
101 123Right-handed alpha
Helix 5
5
A
135 137Right-handed 310
Helix 6
6
A
149 166Right-handed alpha
Helix 7
7
A
184 197Right-handed alpha
Helix 8
8
A
202 206Right-handed 310
Helix 9
9
A
222 238Right-handed alpha
Helix 10
10
A
260 264Right-handed 310
Helix 11
11
A
269 286Right-handed alpha
Helix 12
12
A
300 304Right-handed 310
Helix 13
13
A
323 331Right-handed 310
Helix 14
14
B
11 18Right-handed alpha
Helix 15
15
B
31 39Right-handed alpha
Helix 16
16
B
58 72Right-handed alpha
Helix 17
17
B
101 123Right-handed alpha
Helix 18
18
B
135 137Right-handed 310
Helix 19
19
B
149 166Right-handed alpha
Helix 20
20
B
184 197Right-handed alpha
Helix 21
21
B
202 206Right-handed 310
Helix 22
22
B
222 238Right-handed alpha
Helix 23
23
B
260 264Right-handed 310
Helix 24
24
B
269 286Right-handed alpha
Helix 25
25
B
300 304Right-handed 310
Helix 26
26
B
323 331Right-handed 310
Helix 27
27
C
11 18Right-handed alpha
Helix 28
28
C
31 39Right-handed alpha
Helix 29
29
C
58 72Right-handed alpha
Helix 30
30
C
101 123Right-handed alpha
Helix 31
31
C
135 137Right-handed 310
Helix 32
32
C
149 166Right-handed alpha
Helix 33
33
C
184 197Right-handed alpha
Helix 34
34
C
202 206Right-handed 310
Helix 35
35
C
222 238Right-handed alpha
Helix 36
36
C
260 264Right-handed 310
Helix 37
37
C
269 286Right-handed alpha
Helix 38
38
C
300 304Right-handed 310
Helix 39
39
C
323 331Right-handed 310
Helix 40
40
D
11 18Right-handed alpha
Helix 41
41
D
31 39Right-handed alpha
Helix 42
42
D
58 72Right-handed alpha
Helix 43
43
D
101 123Right-handed alpha
Helix 44
44
D
135 137Right-handed 310
Helix 45
45
D
149 166Right-handed alpha
Helix 46
46
D
184 197Right-handed alpha
Helix 47
47
D
202 206Right-handed 310
Helix 48
48
D
222 238Right-handed alpha
Helix 49
49
D
260 264Right-handed 310
Helix 50
50
D
269 286Right-handed alpha
Helix 51
51
D
300 304Right-handed 310
Helix 52
52
D
323 331Right-handed 310
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There are 8 sheets in PDB entry 1HJS. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA, CB, DA, DB,

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
290 296parallel
Strand 3
A
240 245parallel
Strand 4
A
208 212parallel
Strand 5
A
174 179parallel
Strand 6
A
129 132parallel
Strand 7
A
75 80parallel
Strand 8
A
43 48parallel
Strand 9
A
4 8parallel
Strand 10
A
4 8first strand
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
A
145 146anti-parallel
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 8first strand
Strand 2
B
290 296parallel
Strand 3
B
240 245parallel
Strand 4
B
208 212parallel
Strand 5
B
174 179parallel
Strand 6
B
129 132parallel
Strand 7
B
75 80parallel
Strand 8
B
43 48parallel
Strand 9
B
4 8parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 140first strand
Strand 2
B
145 146anti-parallel
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There are 9 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 8first strand
Strand 2
C
290 296parallel
Strand 3
C
240 245parallel
Strand 4
C
208 212parallel
Strand 5
C
174 179parallel
Strand 6
C
129 132parallel
Strand 7
C
75 80parallel
Strand 8
C
43 48parallel
Strand 9
C
4 8parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
139 140first strand
Strand 2
C
145 146anti-parallel
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There are 17 strands in DA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 8first strand
Strand 2
D
290 296parallel
Strand 3
D
240 245parallel
Strand 4
D
43 48first strand
Strand 5
D
4 8parallel
Strand 6
D
75 80first strand
Strand 7
D
43 48parallel
Strand 8
D
129 132first strand
Strand 9
D
75 80parallel
Strand 10
D
174 179first strand
Strand 11
D
129 132parallel
Strand 12
D
208 212first strand
Strand 13
D
174 179parallel
Strand 14
D
240 245first strand
Strand 15
D
208 212parallel
Strand 16
D
290 296first strand
Strand 17
D
4 8parallel
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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
139 140first strand
Strand 2
D
145 146anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il