Analysis of interatomic Contacts of Structural Units in PDB entry:
1HKG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HKG entry

There is 1 chain in PDB entry 1HKG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ALA 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 1HKG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 17Right-handed alpha
Helix 2
2
A
20 28Right-handed alpha
Helix 3
3
A
29 38Right-handed alpha
Helix 4
4
A
111 124Right-handed alpha
Helix 5
5
A
173 179Right-handed alpha
Helix 6
6
A
195 201Right-handed alpha
Helix 7
7
A
245 249Right-handed 310
Helix 8
8
A
263 269Right-handed alpha
Helix 9
9
A
274 279Right-handed alpha
Helix 10
10
A
285 287Right-handed 310
Helix 11
11
A
288 299Right-handed alpha
Helix 12
12
A
332 344Right-handed alpha
Helix 13
13
A
351 371Right-handed alpha
Helix 14
14
A
375 381Right-handed alpha
Helix 15
15
A
400 412Right-handed alpha
Helix 16
16
A
434 449Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 1HKG. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
242 243anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
160 161parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 217first strand
Strand 2
A
204 210anti-parallel
Strand 3
A
387 391parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il