Analysis of interatomic Contacts of Structural Units in PDB entry:
1HN5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HN5 entry

There are 6 chains in PDB entry 1HN5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 1814VAL 2035
B
 LYS 2095LYS 2316
C
 GLU 2422GLY 2669
D
 THR 2767TYR 3016
E
 LEU 3409VAL 3636
F
 VAL 3846ASN 4072
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 60 helices in PDB entry 1HN5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1820 1840Right-handed alpha
Helix 2
2
A
1857 1869Right-handed alpha
Helix 3
3
A
1883 1894Right-handed alpha
Helix 4
4
A
1905 1909Right-handed 310
Helix 5
5
A
1910 1932Right-handed alpha
Helix 6
6
A
1962 1970Right-handed alpha
Helix 7
7
A
1981 1991Right-handed alpha
Helix 8
8
A
1997 2010Right-handed alpha
Helix 9
9
A
2012 2021Right-handed alpha
Helix 10
10
A
2027 2034Right-handed alpha
Helix 11
11
B
2101 2121Right-handed alpha
Helix 12
12
B
2138 2152Right-handed alpha
Helix 13
13
B
2183 2194Right-handed alpha
Helix 14
14
B
2215 2231Right-handed alpha
Helix 15
15
B
2250 2262Right-handed alpha
Helix 16
16
B
2275 2284Right-handed alpha
Helix 17
17
B
2285 2293Right-handed alpha
Helix 18
18
B
2293 2300Right-handed alpha
Helix 19
19
B
2309 2314Right-handed alpha
Helix 20
20
C
2428 2448Right-handed alpha
Helix 21
21
C
2465 2479Right-handed alpha
Helix 22
22
C
2493 2514Right-handed alpha
Helix 23
23
C
2528 2534Right-handed alpha
Helix 24
24
C
2538 2564Right-handed alpha
Helix 25
25
C
2582 2589Right-handed alpha
Helix 26
26
C
2600 2619Right-handed alpha
Helix 27
27
C
2622 2628Right-handed alpha
Helix 28
28
C
2629 2646Right-handed alpha
Helix 29
29
C
2660 2668Right-handed alpha
Helix 30
30
D
2773 2793Right-handed alpha
Helix 31
31
D
2810 2822Right-handed alpha
Helix 32
32
D
2833 2835Right-handed 310
Helix 33
33
D
2836 2854Right-handed alpha
Helix 34
34
D
2865 2871Right-handed alpha
Helix 35
35
D
2873 2881Right-handed alpha
Helix 36
36
D
2885 2895Right-handed alpha
Helix 37
37
D
2900 2915Right-handed alpha
Helix 38
38
D
2944 2956Right-handed alpha
Helix 39
39
D
2967 2979Right-handed alpha
Helix 40
40
D
2984 2993Right-handed alpha
Helix 41
41
D
3006 3015Right-handed alpha
Helix 42
42
E
3415 3435Right-handed alpha
Helix 43
43
E
3449 3460Right-handed alpha
Helix 44
44
E
3492 3496Right-handed 310
Helix 45
45
E
3500 3509Right-handed alpha
Helix 46
46
E
3511 3521Right-handed alpha
Helix 47
47
E
3537 3543Right-handed alpha
Helix 48
48
E
3578 3588Right-handed alpha
Helix 49
49
E
3589 3595Right-handed alpha
Helix 50
50
E
3599 3610Right-handed alpha
Helix 51
51
E
3623 3636Right-handed alpha
Helix 52
52
F
3852 3872Right-handed alpha
Helix 53
53
F
3888 3904Right-handed alpha
Helix 54
54
F
3921 3928Right-handed alpha
Helix 55
55
F
3946 3962Right-handed alpha
Helix 56
56
F
3981 3992Right-handed alpha
Helix 57
57
F
4014 4029Right-handed alpha
Helix 58
58
F
4034 4047Right-handed alpha
Helix 59
59
F
4049 4056Right-handed alpha
Helix 60
60
F
4063 4071Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 1HN5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1873 1878first strand
Strand 2
A
1899 1904parallel
Strand 3
A
1949 1952parallel
Strand 4
A
1846 1851parallel
Strand 5
A
1973 1976parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1933 1936first strand
Strand 2
A
1939 1943anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2265 2268first strand
Strand 2
B
2126 2132parallel
Strand 3
B
2235 2237parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2265 2268first strand
Strand 2
B
2126 2132parallel
Strand 3
B
2240 2241parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2174 2177first strand
Strand 2
B
2205 2208parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2483 2485first strand
Strand 2
C
2521 2525parallel
Strand 3
C
2569 2574parallel
Strand 4
C
2454 2459parallel
Strand 5
C
2592 2595parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2826 2831first strand
Strand 2
D
2858 2863parallel
Strand 3
D
2929 2935parallel
Strand 4
D
2798 2804parallel
Strand 5
D
2958 2961parallel
Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3444 3446first strand
Strand 2
E
3529 3535parallel
Strand 3
E
3486 3491parallel
Strand 4
E
3464 3469parallel
Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
3907 3914first strand
Strand 2
F
3933 3939parallel
Strand 3
F
3966 3972parallel
Strand 4
F
3878 3882parallel
Strand 5
F
4007 4009parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il