Analysis of interatomic Contacts of Structural Units in PDB entry:
1HO8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HO8 entry

There is 1 chain in PDB entry 1HO8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2LYS 478
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 1HO8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 23Right-handed alpha
Helix 2
2
A
26 33Right-handed alpha
Helix 3
3
A
37 53Right-handed alpha
Helix 4
4
A
76 86Right-handed alpha
Helix 5
5
A
89 106Right-handed alpha
Helix 6
6
A
110 120Right-handed alpha
Helix 7
7
A
122 131Right-handed alpha
Helix 8
8
A
135 151Right-handed alpha
Helix 9
9
A
157 167Right-handed alpha
Helix 10
10
A
167 176Right-handed alpha
Helix 11
11
A
179 195Right-handed alpha
Helix 12
12
A
196 205Right-handed alpha
Helix 13
13
A
206 223Right-handed alpha
Helix 14
14
A
238 254Right-handed alpha
Helix 15
15
A
256 265Right-handed alpha
Helix 16
16
A
267 281Right-handed alpha
Helix 17
17
A
283 297Right-handed alpha
Helix 18
18
A
304 317Right-handed alpha
Helix 19
19
A
317 327Right-handed alpha
Helix 20
20
A
332 352Right-handed alpha
Helix 21
21
A
354 366Right-handed alpha
Helix 22
22
A
371 375Right-handed 310
Helix 23
23
A
376 384Right-handed alpha
Helix 24
24
A
385 388Right-handed 310
Helix 25
25
A
389 391Right-handed 310
Helix 26
26
A
392 408Right-handed alpha
Helix 27
27
A
413 434Right-handed alpha
Helix 28
28
A
437 445Right-handed alpha
Helix 29
29
A
445 454Right-handed alpha
Helix 30
30
A
458 476Right-handed alpha
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There are no sheets in PDB entry 1HO8
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il