Analysis of interatomic Contacts of Structural Units in PDB entry:
1HQZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HQZ entry

There are 9 chains in PDB entry 1HQZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 LEU 3ALA 141
2
 LEU 3ALA 141
3
 LEU 3ASN 137
4
 ALA 2ALA 138
5
 LEU 3ALA 138
6
 ALA 2ALA 138
7
 ALA 2ILE 135
8
 PRO 5SER 136
9
 ALA 2ALA 138
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 1HQZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
1
11 25Right-handed alpha
Helix 2
2
1
51 57Right-handed alpha
Helix 3
3
1
92 110Right-handed alpha
Helix 4
4
1
122 126Right-handed 310
Helix 5
5
1
127 137Right-handed alpha
Helix 6
6
2
11 25Right-handed alpha
Helix 7
7
2
51 56Right-handed alpha
Helix 8
8
2
92 98Right-handed alpha
Helix 9
9
2
98 110Right-handed alpha
Helix 10
10
2
122 126Right-handed 310
Helix 11
11
2
127 138Right-handed alpha
Helix 12
12
3
11 25Right-handed alpha
Helix 13
13
3
51 56Right-handed alpha
Helix 14
14
3
92 98Right-handed alpha
Helix 15
15
3
98 110Right-handed alpha
Helix 16
16
3
122 126Right-handed 310
Helix 17
17
3
127 137Right-handed alpha
Helix 18
18
4
11 24Right-handed alpha
Helix 19
19
4
51 56Right-handed alpha
Helix 20
20
4
92 98Right-handed alpha
Helix 21
21
4
98 110Right-handed alpha
Helix 22
22
4
122 126Right-handed 310
Helix 23
23
4
127 137Right-handed alpha
Helix 24
24
5
11 25Right-handed alpha
Helix 25
25
5
51 56Right-handed alpha
Helix 26
26
5
92 98Right-handed alpha
Helix 27
27
5
98 110Right-handed alpha
Helix 28
28
5
122 126Right-handed 310
Helix 29
29
5
127 136Right-handed alpha
Helix 30
30
6
11 25Right-handed alpha
Helix 31
31
6
51 56Right-handed alpha
Helix 32
32
6
92 97Right-handed alpha
Helix 33
33
6
98 110Right-handed alpha
Helix 34
34
6
122 126Right-handed 310
Helix 35
35
6
127 138Right-handed alpha
Helix 36
36
7
11 25Right-handed alpha
Helix 37
37
7
51 56Right-handed alpha
Helix 38
38
7
92 98Right-handed alpha
Helix 39
39
7
98 110Right-handed alpha
Helix 40
40
7
122 126Right-handed 310
Helix 41
41
7
127 135Right-handed alpha
Helix 42
42
8
11 25Right-handed alpha
Helix 43
43
8
51 56Right-handed alpha
Helix 44
44
8
92 98Right-handed alpha
Helix 45
45
8
98 110Right-handed alpha
Helix 46
46
8
122 126Right-handed 310
Helix 47
47
8
127 135Right-handed alpha
Helix 48
48
9
11 25Right-handed alpha
Helix 49
49
9
51 56Right-handed alpha
Helix 50
50
9
92 98Right-handed alpha
Helix 51
51
9
98 110Right-handed alpha
Helix 52
52
9
122 126Right-handed 310
Helix 53
53
9
127 138Right-handed alpha
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There are 9 sheets in PDB entry 1HQZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
43 49first strand
Strand 2
1
32 37anti-parallel
Strand 3
1
65 71anti-parallel
Strand 4
1
80 86anti-parallel
Strand 5
1
116 120parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
43 49first strand
Strand 2
2
32 37anti-parallel
Strand 3
2
65 71anti-parallel
Strand 4
2
80 86anti-parallel
Strand 5
2
116 120parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
43 49first strand
Strand 2
3
32 37anti-parallel
Strand 3
3
65 71anti-parallel
Strand 4
3
80 86anti-parallel
Strand 5
3
116 120parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
43 49first strand
Strand 2
4
32 37anti-parallel
Strand 3
4
65 71anti-parallel
Strand 4
4
80 86anti-parallel
Strand 5
4
116 120parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
5
43 49first strand
Strand 2
5
32 37anti-parallel
Strand 3
5
65 71anti-parallel
Strand 4
5
80 86anti-parallel
Strand 5
5
116 120parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
6
43 49first strand
Strand 2
6
32 37anti-parallel
Strand 3
6
65 71anti-parallel
Strand 4
6
80 86anti-parallel
Strand 5
6
116 120parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
7
43 49first strand
Strand 2
7
32 37anti-parallel
Strand 3
7
65 71anti-parallel
Strand 4
7
80 86anti-parallel
Strand 5
7
116 120parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
8
43 49first strand
Strand 2
8
32 37anti-parallel
Strand 3
8
65 71anti-parallel
Strand 4
8
80 86anti-parallel
Strand 5
8
116 120parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
9
43 49first strand
Strand 2
9
32 37anti-parallel
Strand 3
9
65 71anti-parallel
Strand 4
9
80 86anti-parallel
Strand 5
9
116 120parallel
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