Analysis of interatomic Contacts of Structural Units in PDB entry:
1HR8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1HR8 entry

There are 12 chains in PDB entry 1HR8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 14	SER 470
B	PRO 24	GLN 462
C	THR 16	SER 468
D	ALA 20	GLN 462
E	ALA 14	SER 468
F	ALA 20	GLN 462
G	ALA 14	SER 470
H	GLN 22	GLN 462
O	SER 7	CYS 19
P	PHE 10	LEU 18
Q	PHE 10	CYS 19
R	LYS 12	LEU 18

There are166 helices in PDB entry 1HR8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	49	53	Right-handed 310
Helix 2	2	A	59	67	Right-handed alpha
Helix 3	3	A	76	87	Right-handed alpha
Helix 4	4	A	107	109	Right-handed 310
Helix 5	5	A	110	124	Right-handed alpha
Helix 6	6	A	128	147	Right-handed alpha
Helix 7	7	A	149	163	Right-handed alpha
Helix 8	8	A	166	170	Right-handed 310
Helix 9	9	A	175	179	Right-handed 310
Helix 10	10	A	183	195	Right-handed alpha
Helix 11	11	A	196	198	Right-handed 310
Helix 12	12	A	208	221	Right-handed alpha
Helix 13	13	A	272	284	Right-handed alpha
Helix 14	14	A	300	306	Right-handed alpha
Helix 15	15	A	339	353	Right-handed alpha
Helix 16	16	A	363	382	Right-handed alpha
Helix 17	17	A	384	400	Right-handed alpha
Helix 18	18	A	404	414	Right-handed alpha
Helix 19	19	A	416	429	Right-handed alpha
Helix 20	20	A	450	454	Right-handed 310
Helix 21	21	A	455	463	Right-handed alpha
Helix 22	22	B	57	61	Right-handed 310
Helix 23	23	B	67	76	Right-handed alpha
Helix 24	24	B	84	95	Right-handed alpha
Helix 25	25	B	118	132	Right-handed alpha
Helix 26	26	B	136	155	Right-handed alpha
Helix 27	27	B	157	171	Right-handed alpha
Helix 28	28	B	174	178	Right-handed 310
Helix 29	29	B	183	190	Right-handed alpha
Helix 30	30	B	191	203	Right-handed alpha
Helix 31	31	B	204	206	Right-handed 310
Helix 32	32	B	217	230	Right-handed alpha
Helix 33	33	B	281	293	Right-handed alpha
Helix 34	34	B	307	315	Right-handed alpha
Helix 35	35	B	348	365	Right-handed alpha
Helix 36	36	B	369	386	Right-handed alpha
Helix 37	37	B	390	406	Right-handed alpha
Helix 38	38	B	410	420	Right-handed alpha
Helix 39	39	B	422	434	Right-handed alpha
Helix 40	40	B	446	450	Right-handed 310
Helix 41	41	B	452	462	Right-handed alpha
Helix 42	42	C	49	53	Right-handed 310
Helix 43	43	C	59	67	Right-handed alpha
Helix 44	44	C	76	87	Right-handed alpha
Helix 45	45	C	107	109	Right-handed 310
Helix 46	46	C	110	124	Right-handed alpha
Helix 47	47	C	128	147	Right-handed alpha
Helix 48	48	C	149	163	Right-handed alpha
Helix 49	49	C	166	170	Right-handed 310
Helix 50	50	C	175	179	Right-handed 310
Helix 51	51	C	183	195	Right-handed alpha
Helix 52	52	C	196	198	Right-handed 310
Helix 53	53	C	208	221	Right-handed alpha
Helix 54	54	C	272	284	Right-handed alpha
Helix 55	55	C	300	306	Right-handed alpha
Helix 56	56	C	339	353	Right-handed alpha
Helix 57	57	C	357	361	Right-handed 310
Helix 58	58	C	363	382	Right-handed alpha
Helix 59	59	C	384	400	Right-handed alpha
Helix 60	60	C	404	414	Right-handed alpha
Helix 61	61	C	416	429	Right-handed alpha
Helix 62	62	C	450	454	Right-handed 310
Helix 63	63	C	455	463	Right-handed alpha
Helix 64	64	D	57	61	Right-handed 310
Helix 65	65	D	67	76	Right-handed alpha
Helix 66	66	D	84	95	Right-handed alpha
Helix 67	67	D	118	132	Right-handed alpha
Helix 68	68	D	136	155	Right-handed alpha
Helix 69	69	D	157	171	Right-handed alpha
Helix 70	70	D	174	178	Right-handed 310
Helix 71	71	D	183	190	Right-handed alpha
Helix 72	72	D	191	203	Right-handed alpha
Helix 73	73	D	204	206	Right-handed 310
Helix 74	74	D	217	230	Right-handed alpha
Helix 75	75	D	281	293	Right-handed alpha
Helix 76	76	D	307	315	Right-handed alpha
Helix 77	77	D	348	365	Right-handed alpha
Helix 78	78	D	369	386	Right-handed alpha
Helix 79	79	D	390	406	Right-handed alpha
Helix 80	80	D	410	420	Right-handed alpha
Helix 81	81	D	422	434	Right-handed alpha
Helix 82	82	D	446	450	Right-handed 310
Helix 83	83	D	452	462	Right-handed alpha
Helix 84	84	E	49	53	Right-handed 310
Helix 85	85	E	59	67	Right-handed alpha
Helix 86	86	E	76	87	Right-handed alpha
Helix 87	87	E	107	109	Right-handed 310
Helix 88	88	E	110	124	Right-handed alpha
Helix 89	89	E	128	147	Right-handed alpha
Helix 90	90	E	149	163	Right-handed alpha
Helix 91	91	E	166	170	Right-handed 310
Helix 92	92	E	175	179	Right-handed 310
Helix 93	93	E	183	195	Right-handed alpha
Helix 94	94	E	196	198	Right-handed 310
Helix 95	95	E	208	221	Right-handed alpha
Helix 96	96	E	272	284	Right-handed alpha
Helix 97	97	E	300	306	Right-handed alpha
Helix 98	98	E	339	353	Right-handed alpha
Helix 99	99	E	357	361	Right-handed 310
Helix 100	100	E	363	382	Right-handed alpha
Helix 101	101	E	384	400	Right-handed alpha
Helix 102	102	E	404	414	Right-handed alpha
Helix 103	103	E	416	429	Right-handed alpha
Helix 104	104	E	450	454	Right-handed 310
Helix 105	105	E	455	463	Right-handed alpha
Helix 106	106	F	57	61	Right-handed 310
Helix 107	107	F	67	76	Right-handed alpha
Helix 108	108	F	84	95	Right-handed alpha
Helix 109	109	F	118	132	Right-handed alpha
Helix 110	110	F	136	155	Right-handed alpha
Helix 111	111	F	157	171	Right-handed alpha
Helix 112	112	F	174	178	Right-handed 310
Helix 113	113	F	183	190	Right-handed alpha
Helix 114	114	F	191	203	Right-handed alpha
Helix 115	115	F	204	206	Right-handed 310
Helix 116	116	F	217	230	Right-handed alpha
Helix 117	117	F	281	293	Right-handed alpha
Helix 118	118	F	307	315	Right-handed alpha
Helix 119	119	F	348	365	Right-handed alpha
Helix 120	120	F	369	386	Right-handed alpha
Helix 121	121	F	390	406	Right-handed alpha
Helix 122	122	F	410	420	Right-handed alpha
Helix 123	123	F	422	434	Right-handed alpha
Helix 124	124	F	446	450	Right-handed 310
Helix 125	125	F	452	462	Right-handed alpha
Helix 126	126	G	49	53	Right-handed 310
Helix 127	127	G	59	67	Right-handed alpha
Helix 128	128	G	76	87	Right-handed alpha
Helix 129	129	G	107	109	Right-handed 310
Helix 130	130	G	110	124	Right-handed alpha
Helix 131	131	G	128	147	Right-handed alpha
Helix 132	132	G	149	163	Right-handed alpha
Helix 133	133	G	166	170	Right-handed 310
Helix 134	134	G	175	179	Right-handed 310
Helix 135	135	G	183	195	Right-handed alpha
Helix 136	136	G	196	198	Right-handed 310
Helix 137	137	G	208	221	Right-handed alpha
Helix 138	138	G	272	284	Right-handed alpha
Helix 139	139	G	300	306	Right-handed alpha
Helix 140	140	G	339	353	Right-handed alpha
Helix 141	141	G	363	382	Right-handed alpha
Helix 142	142	G	384	400	Right-handed alpha
Helix 143	143	G	404	414	Right-handed alpha
Helix 144	144	G	416	429	Right-handed alpha
Helix 145	145	G	450	454	Right-handed 310
Helix 146	146	G	455	463	Right-handed alpha
Helix 147	147	H	57	61	Right-handed 310
Helix 148	148	H	67	76	Right-handed alpha
Helix 149	149	H	84	95	Right-handed alpha
Helix 150	150	H	118	132	Right-handed alpha
Helix 151	151	H	136	155	Right-handed alpha
Helix 152	152	H	157	171	Right-handed alpha
Helix 153	153	H	174	178	Right-handed 310
Helix 154	154	H	183	190	Right-handed alpha
Helix 155	155	H	191	203	Right-handed alpha
Helix 156	156	H	204	206	Right-handed 310
Helix 157	157	H	217	230	Right-handed alpha
Helix 158	158	H	281	293	Right-handed alpha
Helix 159	159	H	307	315	Right-handed alpha
Helix 160	160	H	348	365	Right-handed alpha
Helix 161	161	H	369	386	Right-handed alpha
Helix 162	162	H	390	406	Right-handed alpha
Helix 163	163	H	410	420	Right-handed alpha
Helix 164	164	H	422	434	Right-handed alpha
Helix 165	165	H	446	450	Right-handed 310
Helix 166	166	H	452	462	Right-handed alpha

There are 16 sheets in PDB entry 1HR8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	23	first strand
Strand 2	A	29	33	anti-parallel
Strand 3	A	200	205	parallel
Strand 4	A	40	46	anti-parallel
Strand 5	A	100	106	anti-parallel
Strand 6	A	91	95	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	244	first strand
Strand 2	A	443	447	parallel
Strand 3	A	257	264	anti-parallel
Strand 4	A	327	335	anti-parallel
Strand 5	A	313	322	anti-parallel
Strand 6	A	285	286	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	30	first strand
Strand 2	B	36	41	anti-parallel
Strand 3	B	208	214	parallel
Strand 4	B	47	54	anti-parallel
Strand 5	B	108	115	anti-parallel
Strand 6	B	98	104	anti-parallel
Strand 7	O	15	17	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	254	259	first strand
Strand 2	B	439	445	parallel
Strand 3	B	265	273	anti-parallel
Strand 4	B	334	343	anti-parallel
Strand 5	B	322	329	anti-parallel
Strand 6	B	294	296	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	23	first strand
Strand 2	C	29	33	anti-parallel
Strand 3	C	200	205	parallel
Strand 4	C	40	46	anti-parallel
Strand 5	C	100	106	anti-parallel
Strand 6	C	91	95	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	240	244	first strand
Strand 2	C	443	447	parallel
Strand 3	C	257	264	anti-parallel
Strand 4	C	327	335	anti-parallel
Strand 5	C	313	322	anti-parallel
Strand 6	C	285	286	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	27	30	first strand
Strand 2	D	36	41	anti-parallel
Strand 3	D	208	214	parallel
Strand 4	D	47	54	anti-parallel
Strand 5	D	108	115	anti-parallel
Strand 6	D	98	104	anti-parallel
Strand 7	P	15	17	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	254	259	first strand
Strand 2	D	439	445	parallel
Strand 3	D	265	273	anti-parallel
Strand 4	D	334	343	anti-parallel
Strand 5	D	322	329	anti-parallel
Strand 6	D	294	296	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	20	23	first strand
Strand 2	E	29	33	anti-parallel
Strand 3	E	200	205	parallel
Strand 4	E	40	46	anti-parallel
Strand 5	E	100	106	anti-parallel
Strand 6	E	91	95	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	240	244	first strand
Strand 2	E	443	447	parallel
Strand 3	E	257	264	anti-parallel
Strand 4	E	327	335	anti-parallel
Strand 5	E	313	322	anti-parallel
Strand 6	E	285	286	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	27	30	first strand
Strand 2	F	36	41	anti-parallel
Strand 3	F	208	214	parallel
Strand 4	F	47	54	anti-parallel
Strand 5	F	108	115	anti-parallel
Strand 6	F	98	104	anti-parallel
Strand 7	Q	15	17	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	254	259	first strand
Strand 2	F	439	445	parallel
Strand 3	F	265	273	anti-parallel
Strand 4	F	334	343	anti-parallel
Strand 5	F	322	329	anti-parallel
Strand 6	F	294	296	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	20	23	first strand
Strand 2	G	29	33	anti-parallel
Strand 3	G	200	205	parallel
Strand 4	G	40	46	anti-parallel
Strand 5	G	100	106	anti-parallel
Strand 6	G	91	95	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	240	244	first strand
Strand 2	G	443	447	parallel
Strand 3	G	257	264	anti-parallel
Strand 4	G	327	335	anti-parallel
Strand 5	G	313	322	anti-parallel
Strand 6	G	285	286	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	27	30	first strand
Strand 2	H	36	41	anti-parallel
Strand 3	H	208	214	parallel
Strand 4	H	47	54	anti-parallel
Strand 5	H	108	115	anti-parallel
Strand 6	H	98	103	anti-parallel
Strand 7	R	16	17	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	254	259	first strand
Strand 2	H	439	445	parallel
Strand 3	H	265	273	anti-parallel
Strand 4	H	334	343	anti-parallel
Strand 5	H	322	329	anti-parallel
Strand 6	H	294	296	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1HR8

Analysis of interatomic Contacts of Structural Units in PDB entry:
1HR8