Analysis of interatomic Contacts of Structural Units in PDB entry:
1HR9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1HR9 entry

There are 12 chains in PDB entry 1HR9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 14	SER 470
B	PRO 24	GLN 462
C	THR 16	SER 468
D	GLN 22	GLN 462
E	ALA 14	SER 468
F	ALA 20	GLN 462
G	ALA 14	SER 468
H	ILE 23	GLN 462
O	LEU 2	ALA 9
P	LEU 2	ALA 9
Q	LEU 2	ALA 9
R	LEU 2	ALA 9

There are160 helices in PDB entry 1HR9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	49	53	Right-handed 310
Helix 2	2	A	59	67	Right-handed alpha
Helix 3	3	A	76	86	Right-handed alpha
Helix 4	4	A	107	109	Right-handed 310
Helix 5	5	A	110	124	Right-handed alpha
Helix 6	6	A	128	147	Right-handed alpha
Helix 7	7	A	149	163	Right-handed alpha
Helix 8	8	A	166	170	Right-handed 310
Helix 9	9	A	175	179	Right-handed 310
Helix 10	10	A	183	195	Right-handed alpha
Helix 11	11	A	196	198	Right-handed 310
Helix 12	12	A	208	221	Right-handed alpha
Helix 13	13	A	272	284	Right-handed alpha
Helix 14	14	A	300	306	Right-handed alpha
Helix 15	15	A	339	353	Right-handed alpha
Helix 16	16	A	363	382	Right-handed alpha
Helix 17	17	A	384	400	Right-handed alpha
Helix 18	18	A	404	414	Right-handed alpha
Helix 19	19	A	416	429	Right-handed alpha
Helix 20	20	A	450	454	Right-handed 310
Helix 21	21	A	455	463	Right-handed alpha
Helix 22	22	B	57	61	Right-handed 310
Helix 23	23	B	67	76	Right-handed alpha
Helix 24	24	B	84	95	Right-handed alpha
Helix 25	25	B	118	131	Right-handed alpha
Helix 26	26	B	138	155	Right-handed alpha
Helix 27	27	B	157	171	Right-handed alpha
Helix 28	28	B	183	190	Right-handed alpha
Helix 29	29	B	191	203	Right-handed alpha
Helix 30	30	B	204	206	Right-handed 310
Helix 31	31	B	217	230	Right-handed alpha
Helix 32	32	B	281	293	Right-handed alpha
Helix 33	33	B	307	315	Right-handed alpha
Helix 34	34	B	348	365	Right-handed alpha
Helix 35	35	B	369	386	Right-handed alpha
Helix 36	36	B	390	406	Right-handed alpha
Helix 37	37	B	410	420	Right-handed alpha
Helix 38	38	B	422	434	Right-handed alpha
Helix 39	39	B	446	450	Right-handed 310
Helix 40	40	B	452	462	Right-handed alpha
Helix 41	41	C	49	53	Right-handed 310
Helix 42	42	C	59	67	Right-handed alpha
Helix 43	43	C	76	86	Right-handed alpha
Helix 44	44	C	107	109	Right-handed 310
Helix 45	45	C	110	124	Right-handed alpha
Helix 46	46	C	128	147	Right-handed alpha
Helix 47	47	C	149	163	Right-handed alpha
Helix 48	48	C	166	170	Right-handed 310
Helix 49	49	C	175	182	Right-handed 310
Helix 50	50	C	183	195	Right-handed alpha
Helix 51	51	C	196	198	Right-handed 310
Helix 52	52	C	208	221	Right-handed alpha
Helix 53	53	C	272	284	Right-handed alpha
Helix 54	54	C	300	306	Right-handed alpha
Helix 55	55	C	339	353	Right-handed alpha
Helix 56	56	C	363	382	Right-handed alpha
Helix 57	57	C	384	400	Right-handed alpha
Helix 58	58	C	404	414	Right-handed alpha
Helix 59	59	C	416	429	Right-handed alpha
Helix 60	60	C	449	454	Right-handed 310
Helix 61	61	C	455	463	Right-handed alpha
Helix 62	62	D	57	61	Right-handed 310
Helix 63	63	D	67	76	Right-handed alpha
Helix 64	64	D	84	95	Right-handed alpha
Helix 65	65	D	118	131	Right-handed alpha
Helix 66	66	D	138	155	Right-handed alpha
Helix 67	67	D	157	171	Right-handed alpha
Helix 68	68	D	183	190	Right-handed alpha
Helix 69	69	D	191	203	Right-handed alpha
Helix 70	70	D	204	206	Right-handed 310
Helix 71	71	D	217	230	Right-handed alpha
Helix 72	72	D	281	293	Right-handed alpha
Helix 73	73	D	307	315	Right-handed alpha
Helix 74	74	D	348	365	Right-handed alpha
Helix 75	75	D	369	386	Right-handed alpha
Helix 76	76	D	390	406	Right-handed alpha
Helix 77	77	D	410	420	Right-handed alpha
Helix 78	78	D	422	434	Right-handed alpha
Helix 79	79	D	446	450	Right-handed 310
Helix 80	80	D	452	462	Right-handed alpha
Helix 81	81	E	49	53	Right-handed 310
Helix 82	82	E	59	67	Right-handed alpha
Helix 83	83	E	76	86	Right-handed alpha
Helix 84	84	E	107	109	Right-handed 310
Helix 85	85	E	110	124	Right-handed alpha
Helix 86	86	E	128	147	Right-handed alpha
Helix 87	87	E	149	163	Right-handed alpha
Helix 88	88	E	166	170	Right-handed 310
Helix 89	89	E	175	179	Right-handed 310
Helix 90	90	E	183	195	Right-handed alpha
Helix 91	91	E	196	198	Right-handed 310
Helix 92	92	E	208	221	Right-handed alpha
Helix 93	93	E	272	284	Right-handed alpha
Helix 94	94	E	300	306	Right-handed alpha
Helix 95	95	E	339	353	Right-handed alpha
Helix 96	96	E	363	382	Right-handed alpha
Helix 97	97	E	384	400	Right-handed alpha
Helix 98	98	E	404	414	Right-handed alpha
Helix 99	99	E	416	429	Right-handed alpha
Helix 100	100	E	450	454	Right-handed 310
Helix 101	101	E	455	463	Right-handed alpha
Helix 102	102	F	57	61	Right-handed 310
Helix 103	103	F	67	76	Right-handed alpha
Helix 104	104	F	84	95	Right-handed alpha
Helix 105	105	F	118	131	Right-handed alpha
Helix 106	106	F	138	155	Right-handed alpha
Helix 107	107	F	157	171	Right-handed alpha
Helix 108	108	F	183	190	Right-handed alpha
Helix 109	109	F	191	203	Right-handed alpha
Helix 110	110	F	204	206	Right-handed 310
Helix 111	111	F	217	230	Right-handed alpha
Helix 112	112	F	281	293	Right-handed alpha
Helix 113	113	F	307	315	Right-handed alpha
Helix 114	114	F	348	365	Right-handed alpha
Helix 115	115	F	369	386	Right-handed alpha
Helix 116	116	F	390	406	Right-handed alpha
Helix 117	117	F	410	420	Right-handed alpha
Helix 118	118	F	422	434	Right-handed alpha
Helix 119	119	F	446	450	Right-handed 310
Helix 120	120	F	452	462	Right-handed alpha
Helix 121	121	G	49	53	Right-handed 310
Helix 122	122	G	59	67	Right-handed alpha
Helix 123	123	G	76	87	Right-handed alpha
Helix 124	124	G	107	109	Right-handed 310
Helix 125	125	G	110	124	Right-handed alpha
Helix 126	126	G	128	147	Right-handed alpha
Helix 127	127	G	149	163	Right-handed alpha
Helix 128	128	G	166	170	Right-handed 310
Helix 129	129	G	175	179	Right-handed 310
Helix 130	130	G	183	195	Right-handed alpha
Helix 131	131	G	196	198	Right-handed 310
Helix 132	132	G	208	221	Right-handed alpha
Helix 133	133	G	272	284	Right-handed alpha
Helix 134	134	G	300	306	Right-handed alpha
Helix 135	135	G	339	353	Right-handed alpha
Helix 136	136	G	363	382	Right-handed alpha
Helix 137	137	G	384	400	Right-handed alpha
Helix 138	138	G	404	414	Right-handed alpha
Helix 139	139	G	416	429	Right-handed alpha
Helix 140	140	G	450	454	Right-handed 310
Helix 141	141	G	455	463	Right-handed alpha
Helix 142	142	H	57	61	Right-handed 310
Helix 143	143	H	67	76	Right-handed alpha
Helix 144	144	H	84	95	Right-handed alpha
Helix 145	145	H	118	131	Right-handed alpha
Helix 146	146	H	138	155	Right-handed alpha
Helix 147	147	H	157	171	Right-handed alpha
Helix 148	148	H	183	190	Right-handed alpha
Helix 149	149	H	191	203	Right-handed alpha
Helix 150	150	H	204	206	Right-handed 310
Helix 151	151	H	217	230	Right-handed alpha
Helix 152	152	H	281	293	Right-handed alpha
Helix 153	153	H	307	315	Right-handed alpha
Helix 154	154	H	348	365	Right-handed alpha
Helix 155	155	H	369	386	Right-handed alpha
Helix 156	156	H	390	406	Right-handed alpha
Helix 157	157	H	410	420	Right-handed alpha
Helix 158	158	H	422	434	Right-handed alpha
Helix 159	159	H	446	450	Right-handed 310
Helix 160	160	H	452	462	Right-handed alpha

There are 16 sheets in PDB entry 1HR9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	23	first strand
Strand 2	A	29	33	anti-parallel
Strand 3	A	200	205	parallel
Strand 4	A	40	46	anti-parallel
Strand 5	A	100	106	anti-parallel
Strand 6	A	91	95	anti-parallel

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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	244	first strand
Strand 2	A	443	447	parallel
Strand 3	A	257	264	anti-parallel
Strand 4	A	327	335	anti-parallel
Strand 5	A	313	322	anti-parallel
Strand 6	A	285	286	anti-parallel

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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	30	first strand
Strand 2	B	36	41	anti-parallel
Strand 3	B	208	214	parallel
Strand 4	B	47	54	anti-parallel
Strand 5	B	108	115	anti-parallel
Strand 6	B	98	104	anti-parallel
Strand 7	O	7	8	anti-parallel

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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	255	259	first strand
Strand 2	B	439	445	parallel
Strand 3	B	265	273	anti-parallel
Strand 4	B	334	343	anti-parallel
Strand 5	B	322	329	anti-parallel
Strand 6	B	294	296	anti-parallel

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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	23	first strand
Strand 2	C	29	33	anti-parallel
Strand 3	C	200	205	parallel
Strand 4	C	40	46	anti-parallel
Strand 5	C	100	106	anti-parallel
Strand 6	C	91	95	anti-parallel

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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	240	244	first strand
Strand 2	C	443	447	parallel
Strand 3	C	257	264	anti-parallel
Strand 4	C	327	335	anti-parallel
Strand 5	C	313	322	anti-parallel
Strand 6	C	285	287	anti-parallel

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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	26	30	first strand
Strand 2	D	36	41	anti-parallel
Strand 3	D	208	214	parallel
Strand 4	D	47	54	anti-parallel
Strand 5	D	108	115	anti-parallel
Strand 6	D	98	104	anti-parallel
Strand 7	P	7	8	anti-parallel

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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	255	259	first strand
Strand 2	D	439	445	parallel
Strand 3	D	265	273	anti-parallel
Strand 4	D	334	343	anti-parallel
Strand 5	D	322	329	anti-parallel
Strand 6	D	294	296	anti-parallel

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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	20	23	first strand
Strand 2	E	29	33	anti-parallel
Strand 3	E	200	205	parallel
Strand 4	E	40	46	anti-parallel
Strand 5	E	100	106	anti-parallel
Strand 6	E	91	95	anti-parallel

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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	240	244	first strand
Strand 2	E	443	447	parallel
Strand 3	E	257	264	anti-parallel
Strand 4	E	327	335	anti-parallel
Strand 5	E	313	322	anti-parallel
Strand 6	E	285	287	anti-parallel

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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	26	30	first strand
Strand 2	F	36	41	anti-parallel
Strand 3	F	208	214	parallel
Strand 4	F	47	54	anti-parallel
Strand 5	F	108	115	anti-parallel
Strand 6	F	98	104	anti-parallel
Strand 7	Q	7	8	anti-parallel

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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	255	259	first strand
Strand 2	F	439	445	parallel
Strand 3	F	265	273	anti-parallel
Strand 4	F	334	343	anti-parallel
Strand 5	F	322	329	anti-parallel
Strand 6	F	294	296	anti-parallel

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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	20	23	first strand
Strand 2	G	29	33	anti-parallel
Strand 3	G	200	205	parallel
Strand 4	G	40	46	anti-parallel
Strand 5	G	100	106	anti-parallel
Strand 6	G	91	95	anti-parallel

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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	240	244	first strand
Strand 2	G	443	447	parallel
Strand 3	G	257	264	anti-parallel
Strand 4	G	327	335	anti-parallel
Strand 5	G	313	322	anti-parallel
Strand 6	G	285	287	anti-parallel

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There are 7 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	26	30	first strand
Strand 2	H	36	41	anti-parallel
Strand 3	H	208	214	parallel
Strand 4	H	47	54	anti-parallel
Strand 5	H	108	115	anti-parallel
Strand 6	H	98	104	anti-parallel
Strand 7	R	7	8	anti-parallel

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There are 6 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	255	259	first strand
Strand 2	H	439	445	parallel
Strand 3	H	265	273	anti-parallel
Strand 4	H	334	343	anti-parallel
Strand 5	H	322	329	anti-parallel
Strand 6	H	294	296	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1HR9

Analysis of interatomic Contacts of Structural Units in PDB entry:
1HR9