Analysis of interatomic Contacts of Structural Units in PDB entry:
1HSS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HSS entry

There are 4 chains in PDB entry 1HSS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 5ALA 124
B
 MET 5ALA 124
C
 MET 5ALA 124
D
 MET 5ALA 124
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1HSS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
A1
A
20 27Right-handed alpha
Helix 2
A2
A
35 46Right-handed alpha
Helix 3
A3
A
53 66Right-handed alpha
Helix 4
A4
A
85 93Right-handed alpha
Helix 5
A5
A
95 99Right-handed alpha
Helix 6
A6
A
116 119Right-handed alpha
Helix 7
B1
B
20 27Right-handed alpha
Helix 8
B2
B
35 46Right-handed alpha
Helix 9
B3
B
53 66Right-handed alpha
Helix 10
B4
B
85 93Right-handed alpha
Helix 11
B5
B
95 99Right-handed alpha
Helix 12
B6
B
116 119Right-handed alpha
Helix 13
C1
C
20 27Right-handed alpha
Helix 14
C2
C
35 46Right-handed alpha
Helix 15
C3
C
53 66Right-handed alpha
Helix 16
C4
C
85 93Right-handed alpha
Helix 17
C5
C
95 99Right-handed alpha
Helix 18
C6
C
116 119Right-handed alpha
Helix 19
D1
D
20 27Right-handed alpha
Helix 20
D2
D
35 46Right-handed alpha
Helix 21
D3
D
53 66Right-handed alpha
Helix 22
D4
D
85 93Right-handed alpha
Helix 23
D5
D
95 99Right-handed alpha
Helix 24
D6
D
116 119Right-handed alpha
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There are 4 sheets in PDB entry 1HSS. Click on sheet of interest to get list of strands forming it: S1, S2, S3, S4,

There are 2 strands in S1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 104first strand
Strand 2
A
111 112anti-parallel
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There are 2 strands in S2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 104first strand
Strand 2
B
111 112anti-parallel
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There are 2 strands in S3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
103 104first strand
Strand 2
C
111 112anti-parallel
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There are 2 strands in S4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
103 104first strand
Strand 2
D
111 112anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il