Analysis of interatomic Contacts of Structural Units in PDB entry:
1HV5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HV5 entry

There are 6 chains in PDB entry 1HV5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 101GLY 262
B
 MET 101PRO 264
C
 MET 101GLY 262
D
 MET 101GLY 262
E
 MET 101GLN 265
F
 MET 101GLY 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1HV5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
126 143Right-handed alpha
Helix 2
2
A
213 225Right-handed alpha
Helix 3
3
A
250 261Right-handed alpha
Helix 4
4
B
126 143Right-handed alpha
Helix 5
5
B
213 225Right-handed alpha
Helix 6
6
B
250 262Right-handed alpha
Helix 7
7
C
126 143Right-handed alpha
Helix 8
8
C
213 225Right-handed alpha
Helix 9
9
C
250 262Right-handed alpha
Helix 10
10
D
126 143Right-handed alpha
Helix 11
11
D
213 225Right-handed alpha
Helix 12
12
D
250 261Right-handed alpha
Helix 13
13
E
126 143Right-handed alpha
Helix 14
14
E
213 225Right-handed alpha
Helix 15
15
E
250 262Right-handed alpha
Helix 16
16
F
126 143Right-handed alpha
Helix 17
17
F
213 225Right-handed alpha
Helix 18
18
F
250 261Right-handed alpha
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There are 18 sheets in PDB entry 1HV5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 105first strand
Strand 2
A
108 111anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 151first strand
Strand 2
A
113 118parallel
Strand 3
A
159 164parallel
Strand 4
A
193 198parallel
Strand 5
A
182 185anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 204first strand
Strand 2
A
211 212parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 105first strand
Strand 2
B
108 111anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 151first strand
Strand 2
B
113 118parallel
Strand 3
B
159 164parallel
Strand 4
B
193 198parallel
Strand 5
B
182 185anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
203 204first strand
Strand 2
B
211 212parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
103 105first strand
Strand 2
C
108 110anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
148 151first strand
Strand 2
C
113 118parallel
Strand 3
C
159 164parallel
Strand 4
C
193 198parallel
Strand 5
C
182 185anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
203 204first strand
Strand 2
C
211 212parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
102 105first strand
Strand 2
D
108 111anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
148 151first strand
Strand 2
D
113 118parallel
Strand 3
D
159 164parallel
Strand 4
D
193 198parallel
Strand 5
D
182 185anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
203 204first strand
Strand 2
D
211 212parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
102 105first strand
Strand 2
E
108 111anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
148 151first strand
Strand 2
E
113 118parallel
Strand 3
E
159 164parallel
Strand 4
E
193 198parallel
Strand 5
E
182 185anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
203 204first strand
Strand 2
E
211 212parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
103 105first strand
Strand 2
F
108 110anti-parallel
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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
148 151first strand
Strand 2
F
113 118parallel
Strand 3
F
159 164parallel
Strand 4
F
193 198parallel
Strand 5
F
182 185anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
203 204first strand
Strand 2
F
211 212parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il