Analysis of interatomic Contacts of Structural Units in PDB entry:
1HV9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HV9 entry

There are 2 chains in PDB entry 1HV9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4PRO 452
B
 ASN 3PRO 452
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 1HV9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 20Right-handed 310
Helix 2
2
A
24 27Right-handed 310
Helix 3
3
A
35 47Right-handed alpha
Helix 4
4
A
58 66Right-handed alpha
Helix 5
5
A
81 90Right-handed alpha
Helix 6
6
A
91 93Right-handed 310
Helix 7
7
A
110 121Right-handed alpha
Helix 8
8
A
161 165Right-handed 310
Helix 9
9
A
177 185Right-handed alpha
Helix 10
10
A
197 199Right-handed 310
Helix 11
11
A
200 207Right-handed alpha
Helix 12
12
A
219 224Right-handed 310
Helix 13
13
A
228 250Right-handed alpha
Helix 14
14
B
16 20Right-handed 310
Helix 15
15
B
24 27Right-handed 310
Helix 16
16
B
35 44Right-handed alpha
Helix 17
17
B
58 66Right-handed alpha
Helix 18
18
B
81 90Right-handed alpha
Helix 19
19
B
91 93Right-handed 310
Helix 20
20
B
110 121Right-handed alpha
Helix 21
21
B
161 165Right-handed 310
Helix 22
22
B
177 186Right-handed alpha
Helix 23
23
B
197 199Right-handed 310
Helix 24
24
B
200 208Right-handed alpha
Helix 25
25
B
220 224Right-handed 310
Helix 26
26
B
228 250Right-handed alpha
Helix 27
27
B
256 258Right-handed 310
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There are 10 sheets in PDB entry 1HV9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F40, G, H, I, J,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 75first strand
Strand 2
A
51 55parallel
Strand 3
A
6 12parallel
Strand 4
A
98 103parallel
Strand 5
A
167 176anti-parallel
Strand 6
A
126 132anti-parallel
Strand 7
A
212 215parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 30first strand
Strand 2
A
33 34anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 145first strand
Strand 2
A
148 153anti-parallel
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There are 25 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 254first strand
Strand 2
A
273 274parallel
Strand 3
A
291 292parallel
Strand 4
A
308 309parallel
Strand 5
A
325 326parallel
Strand 6
A
343 355parallel
Strand 7
A
330 332parallel
Strand 8
A
314 316parallel
Strand 9
A
297 299parallel
Strand 10
A
278 286parallel
Strand 11
A
260 268parallel
Strand 12
A
278 286parallel
Strand 13
A
302 303parallel
Strand 14
A
319 320parallel
Strand 15
A
337 338parallel
Strand 16
A
343 355parallel
Strand 17
A
360 372parallel
Strand 18
A
395 397parallel
Strand 19
A
413 415parallel
Strand 20
A
395 397parallel
Strand 21
A
360 372parallel
Strand 22
A
377 378parallel
Strand 23
A
402 403parallel
Strand 24
A
420 421parallel
Strand 25
A
436 437parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
383 385first strand
Strand 2
A
408 410parallel
Strand 3
A
426 427parallel
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There are 6 strands in F40 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 55first strand
Strand 2
B
6 11parallel
Strand 3
B
98 103parallel
Strand 4
B
167 176anti-parallel
Strand 5
B
126 132anti-parallel
Strand 6
B
212 215parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 30first strand
Strand 2
B
33 34anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 145first strand
Strand 2
B
148 153anti-parallel
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There are 25 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
253 254first strand
Strand 2
B
273 274parallel
Strand 3
B
291 292parallel
Strand 4
B
308 309parallel
Strand 5
B
325 326parallel
Strand 6
B
343 355parallel
Strand 7
B
330 332parallel
Strand 8
B
314 316parallel
Strand 9
B
297 299parallel
Strand 10
B
278 286parallel
Strand 11
B
260 267parallel
Strand 12
B
278 286parallel
Strand 13
B
302 303parallel
Strand 14
B
319 320parallel
Strand 15
B
337 338parallel
Strand 16
B
343 355parallel
Strand 17
B
360 372parallel
Strand 18
B
395 397parallel
Strand 19
B
413 415parallel
Strand 20
B
395 397parallel
Strand 21
B
360 372parallel
Strand 22
B
377 378parallel
Strand 23
B
402 403parallel
Strand 24
B
420 421parallel
Strand 25
B
436 437parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
383 385first strand
Strand 2
B
408 410parallel
Strand 3
B
426 427parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il